Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.1■□□□□ 0.01
GDNFP39905 LINC01023-201ENST00000606054 436 ntBASIC15.1■□□□□ 0.01
GDNFP39905 AC092171.3-201ENST00000610122 2651 ntBASIC15.1■□□□□ 0.01
GDNFP39905 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.1■□□□□ 0.01
GDNFP39905 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 AC022188.1-201ENST00000620960 1664 ntBASIC15.09■□□□□ 0.01
GDNFP39905 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.09■□□□□ 0.01
GDNFP39905 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.09■□□□□ 0.01
GDNFP39905 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.09■□□□□ 0.01
GDNFP39905 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
GDNFP39905 AL513523.2-202ENST00000427283 2040 ntBASIC15.09■□□□□ 0.01
GDNFP39905 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
GDNFP39905 AC046185.3-201ENST00000623228 1824 ntBASIC15.09■□□□□ 0.01
GDNFP39905 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 LYSMD4-203ENST00000378904 2122 ntBASIC15.09■□□□□ 0.01
GDNFP39905 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.09■□□□□ 0.01
GDNFP39905 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.09■□□□□ 0.01
GDNFP39905 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GDNFP39905 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.09■□□□□ 0.01
GDNFP39905 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.09■□□□□ 0.01
GDNFP39905 AL441883.1-201ENST00000566170 1045 ntBASIC15.09■□□□□ 0.01
GDNFP39905 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.09■□□□□ 0.01
GDNFP39905 AL157888.1-201ENST00000631930 593 ntBASIC15.09■□□□□ 0.01
GDNFP39905 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.09■□□□□ 0.01
GDNFP39905 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GDNFP39905 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 MST1L-201ENST00000442552 2185 ntBASIC15.09■□□□□ 0.01
GDNFP39905 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GDNFP39905 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.09■□□□□ 0.01
GDNFP39905 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GDNFP39905 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.09■□□□□ 0.01
GDNFP39905 TSPY26P-202ENST00000565928 3884 ntBASIC15.09■□□□□ 0.01
GDNFP39905 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDNFP39905 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GDNFP39905 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GDNFP39905 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.08■□□□□ 0.01
GDNFP39905 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
GDNFP39905 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
GDNFP39905 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.08■□□□□ 0.01
GDNFP39905 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.08■□□□□ 0.01
GDNFP39905 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GDNFP39905 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
GDNFP39905 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
GDNFP39905 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDNFP39905 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.08■□□□□ 0
GDNFP39905 AC078925.2-201ENST00000624013 1973 ntBASIC15.08■□□□□ 0
GDNFP39905 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDNFP39905 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
GDNFP39905 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.08■□□□□ 0
GDNFP39905 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.08■□□□□ 0
GDNFP39905 DDX43P3-201ENST00000441064 443 ntBASIC15.08■□□□□ 0
GDNFP39905 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.08■□□□□ 0
GDNFP39905 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
GDNFP39905 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.08■□□□□ 0
GDNFP39905 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.08■□□□□ 0
GDNFP39905 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.08■□□□□ 0
GDNFP39905 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.08■□□□□ 0
GDNFP39905 AC139887.4-201ENST00000607877 719 ntBASIC15.08■□□□□ 0
GDNFP39905 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
GDNFP39905 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.08■□□□□ 0
GDNFP39905 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
GDNFP39905 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.08■□□□□ 0
GDNFP39905 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDNFP39905 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDNFP39905 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.08■□□□□ 0
GDNFP39905 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
GDNFP39905 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDNFP39905 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDNFP39905 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.08■□□□□ 0
GDNFP39905 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.08■□□□□ 0
GDNFP39905 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
GDNFP39905 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms