Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
COL15A1P39059 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL15A1P39059 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
COL15A1P39059 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.74■■□□□ 1.07
COL15A1P39059 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
COL15A1P39059 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL15A1P39059 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.74■■□□□ 1.07
COL15A1P39059 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL15A1P39059 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.74■■□□□ 1.07
COL15A1P39059 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COL15A1P39059 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.74■■□□□ 1.07
COL15A1P39059 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL15A1P39059 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.74■■□□□ 1.07
COL15A1P39059 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.74■■□□□ 1.07
COL15A1P39059 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.74■■□□□ 1.07
COL15A1P39059 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.74■■□□□ 1.07
COL15A1P39059 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL15A1P39059 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL15A1P39059 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
COL15A1P39059 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL15A1P39059 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.73■■□□□ 1.07
COL15A1P39059 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
COL15A1P39059 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL15A1P39059 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.73■■□□□ 1.07
COL15A1P39059 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL15A1P39059 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL15A1P39059 AIRN-201ENST00000601203 4374 ntBASIC21.73■■□□□ 1.07
COL15A1P39059 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.73■■□□□ 1.07
COL15A1P39059 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL15A1P39059 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.73■■□□□ 1.07
COL15A1P39059 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL15A1P39059 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.73■■□□□ 1.07
COL15A1P39059 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.73■■□□□ 1.07
COL15A1P39059 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
COL15A1P39059 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.73■■□□□ 1.07
COL15A1P39059 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.73■■□□□ 1.07
COL15A1P39059 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL15A1P39059 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL15A1P39059 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.73■■□□□ 1.07
COL15A1P39059 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.73■■□□□ 1.07
COL15A1P39059 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.72■■□□□ 1.07
COL15A1P39059 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.72■■□□□ 1.07
COL15A1P39059 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
COL15A1P39059 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
COL15A1P39059 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.72■■□□□ 1.07
COL15A1P39059 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
COL15A1P39059 AL355312.1-201ENST00000407115 2176 ntBASIC21.72■■□□□ 1.07
COL15A1P39059 LYSMD4-203ENST00000378904 2122 ntBASIC21.72■■□□□ 1.07
COL15A1P39059 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL15A1P39059 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.72■■□□□ 1.07
COL15A1P39059 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
COL15A1P39059 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.72■■□□□ 1.07
COL15A1P39059 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COL15A1P39059 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.72■■□□□ 1.07
COL15A1P39059 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.72■■□□□ 1.07
COL15A1P39059 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.72■■□□□ 1.07
COL15A1P39059 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.72■■□□□ 1.07
COL15A1P39059 AP001059.3-201ENST00000619053 235 ntBASIC21.72■■□□□ 1.07
COL15A1P39059 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
COL15A1P39059 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL15A1P39059 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL15A1P39059 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL15A1P39059 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL15A1P39059 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COL15A1P39059 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.71■■□□□ 1.07
COL15A1P39059 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL15A1P39059 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL15A1P39059 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL15A1P39059 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.71■■□□□ 1.07
COL15A1P39059 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COL15A1P39059 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL15A1P39059 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.71■■□□□ 1.07
COL15A1P39059 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
COL15A1P39059 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.71■■□□□ 1.07
COL15A1P39059 WBP2-203ENST00000433525 928 ntTSL 2 BASIC21.71■■□□□ 1.07
COL15A1P39059 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.71■■□□□ 1.07
COL15A1P39059 AL512356.2-201ENST00000546955 174 ntBASIC21.71■■□□□ 1.07
COL15A1P39059 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.71■■□□□ 1.07
COL15A1P39059 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.71■■□□□ 1.07
COL15A1P39059 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL15A1P39059 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL15A1P39059 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL15A1P39059 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
COL15A1P39059 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL15A1P39059 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.7■■□□□ 1.07
COL15A1P39059 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
COL15A1P39059 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.7■■□□□ 1.07
COL15A1P39059 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL15A1P39059 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms