Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
SNCAP37840 AC132938.6-201ENST00000623828 1655 ntBASIC14.27□□□□□ -0.12
SNCAP37840 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SNCAP37840 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.27□□□□□ -0.12
SNCAP37840 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNCAP37840 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNCAP37840 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNCAP37840 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNCAP37840 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.27□□□□□ -0.12
SNCAP37840 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SNCAP37840 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.27□□□□□ -0.12
SNCAP37840 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 SNORA78-201ENST00000459373 127 ntBASIC14.27□□□□□ -0.13
SNCAP37840 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.27□□□□□ -0.13
SNCAP37840 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SNCAP37840 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.27□□□□□ -0.13
SNCAP37840 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.27□□□□□ -0.13
SNCAP37840 NEK4P2-201ENST00000580004 1012 ntBASIC14.27□□□□□ -0.13
SNCAP37840 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.27□□□□□ -0.13
SNCAP37840 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.27□□□□□ -0.13
SNCAP37840 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
SNCAP37840 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
SNCAP37840 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SNCAP37840 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SNCAP37840 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.27□□□□□ -0.13
SNCAP37840 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.27□□□□□ -0.13
SNCAP37840 AC060834.1-201ENST00000443027 2032 ntBASIC14.27□□□□□ -0.13
SNCAP37840 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
SNCAP37840 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNCAP37840 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
SNCAP37840 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.27□□□□□ -0.13
SNCAP37840 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.26□□□□□ -0.13
SNCAP37840 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.26□□□□□ -0.13
SNCAP37840 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SNCAP37840 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.26□□□□□ -0.13
SNCAP37840 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.26□□□□□ -0.13
SNCAP37840 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SNCAP37840 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.26□□□□□ -0.13
SNCAP37840 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.26□□□□□ -0.13
SNCAP37840 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SNCAP37840 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SNCAP37840 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.26□□□□□ -0.13
SNCAP37840 MIR3917-201ENST00000580971 93 ntBASIC14.26□□□□□ -0.13
SNCAP37840 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.26□□□□□ -0.13
SNCAP37840 AC105917.1-201ENST00000506637 2539 ntBASIC14.26□□□□□ -0.13
SNCAP37840 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
SNCAP37840 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
SNCAP37840 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SNCAP37840 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.26□□□□□ -0.13
SNCAP37840 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SNCAP37840 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNCAP37840 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 AC100803.2-201ENST00000562459 1963 ntBASIC14.25□□□□□ -0.13
SNCAP37840 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
SNCAP37840 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SNCAP37840 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.25□□□□□ -0.13
SNCAP37840 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SNCAP37840 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms