Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT20P35900 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT20P35900 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.47■□□□□ 0.23
KRT20P35900 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT20P35900 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.47■□□□□ 0.23
KRT20P35900 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KRT20P35900 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.47■□□□□ 0.23
KRT20P35900 AC092329.2-201ENST00000598402 547 ntBASIC16.47■□□□□ 0.23
KRT20P35900 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
KRT20P35900 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT20P35900 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT20P35900 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT20P35900 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT20P35900 AC133963.1-201ENST00000504166 1679 ntBASIC16.46■□□□□ 0.23
KRT20P35900 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT20P35900 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT20P35900 AC100803.2-201ENST00000562459 1963 ntBASIC16.46■□□□□ 0.23
KRT20P35900 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT20P35900 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
KRT20P35900 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
KRT20P35900 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
KRT20P35900 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
KRT20P35900 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT20P35900 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
KRT20P35900 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
KRT20P35900 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT20P35900 DRAXINP1-201ENST00000437611 948 ntBASIC16.46■□□□□ 0.23
KRT20P35900 MINOS1P3-201ENST00000457048 203 ntBASIC16.46■□□□□ 0.23
KRT20P35900 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.46■□□□□ 0.23
KRT20P35900 TOB2P1-201ENST00000469761 992 ntBASIC16.46■□□□□ 0.23
KRT20P35900 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT20P35900 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT20P35900 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT20P35900 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.46■□□□□ 0.23
KRT20P35900 AC092119.3-201ENST00000612618 583 ntBASIC16.46■□□□□ 0.23
KRT20P35900 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.46■□□□□ 0.23
KRT20P35900 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT20P35900 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT20P35900 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
KRT20P35900 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT20P35900 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
KRT20P35900 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT20P35900 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT20P35900 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
KRT20P35900 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
KRT20P35900 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT20P35900 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT20P35900 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT20P35900 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT20P35900 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
KRT20P35900 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT20P35900 AC046158.3-201ENST00000624947 2558 ntBASIC16.45■□□□□ 0.22
KRT20P35900 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
KRT20P35900 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT20P35900 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT20P35900 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
KRT20P35900 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT20P35900 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT20P35900 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT20P35900 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT20P35900 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT20P35900 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT20P35900 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT20P35900 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT20P35900 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT20P35900 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT20P35900 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms