Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.28■□□□□ 0.52
CTNNA1P35221 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.28■□□□□ 0.52
CTNNA1P35221 AC109462.3-201ENST00000573934 613 ntBASIC18.28■□□□□ 0.52
CTNNA1P35221 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.28■□□□□ 0.52
CTNNA1P35221 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.28■□□□□ 0.52
CTNNA1P35221 AC125634.1-201ENST00000438758 1403 ntBASIC18.28■□□□□ 0.52
CTNNA1P35221 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTNNA1P35221 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTNNA1P35221 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CTNNA1P35221 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTNNA1P35221 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTNNA1P35221 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CTNNA1P35221 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTNNA1P35221 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.28■□□□□ 0.52
CTNNA1P35221 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTNNA1P35221 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CTNNA1P35221 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.28■□□□□ 0.52
CTNNA1P35221 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.27■□□□□ 0.52
CTNNA1P35221 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.27■□□□□ 0.52
CTNNA1P35221 FLJ38576-201ENST00000623820 2459 ntBASIC18.27■□□□□ 0.52
CTNNA1P35221 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
CTNNA1P35221 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.27■□□□□ 0.52
CTNNA1P35221 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CTNNA1P35221 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.27■□□□□ 0.52
CTNNA1P35221 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
CTNNA1P35221 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CTNNA1P35221 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 AL645929.1-201ENST00000420084 975 ntBASIC18.27■□□□□ 0.52
CTNNA1P35221 AC104076.2-201ENST00000448912 469 ntBASIC18.27■□□□□ 0.52
CTNNA1P35221 GUSBP12-201ENST00000513727 720 ntBASIC18.27■□□□□ 0.52
CTNNA1P35221 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.27■□□□□ 0.52
CTNNA1P35221 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.27■□□□□ 0.52
CTNNA1P35221 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CTNNA1P35221 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.27■□□□□ 0.52
CTNNA1P35221 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CTNNA1P35221 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTNNA1P35221 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.27■□□□□ 0.51
CTNNA1P35221 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.27■□□□□ 0.51
CTNNA1P35221 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTNNA1P35221 AC092053.1-201ENST00000605787 1936 ntBASIC18.27■□□□□ 0.51
CTNNA1P35221 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTNNA1P35221 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTNNA1P35221 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTNNA1P35221 AC005915.1-201ENST00000624912 2018 ntBASIC18.27■□□□□ 0.51
CTNNA1P35221 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CTNNA1P35221 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.26■□□□□ 0.51
CTNNA1P35221 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CTNNA1P35221 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 AC211429.1-201ENST00000415277 523 ntBASIC18.26■□□□□ 0.51
CTNNA1P35221 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
CTNNA1P35221 AC122714.2-201ENST00000502787 707 ntBASIC18.26■□□□□ 0.51
CTNNA1P35221 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.26■□□□□ 0.51
CTNNA1P35221 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.26■□□□□ 0.51
CTNNA1P35221 AL138831.2-201ENST00000606564 490 ntBASIC18.26■□□□□ 0.51
CTNNA1P35221 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CTNNA1P35221 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.26■□□□□ 0.51
CTNNA1P35221 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.26■□□□□ 0.51
CTNNA1P35221 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.26■□□□□ 0.51
CTNNA1P35221 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNNA1P35221 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTNNA1P35221 AL162727.3-201ENST00000635661 2787 ntBASIC18.25■□□□□ 0.51
CTNNA1P35221 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.25■□□□□ 0.51
CTNNA1P35221 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.25■□□□□ 0.51
CTNNA1P35221 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.25■□□□□ 0.51
CTNNA1P35221 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CTNNA1P35221 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms