Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC23.08■■□□□ 1.28
USP6P35125 AP000842.3-202ENST00000569238 1080 ntBASIC23.08■■□□□ 1.28
USP6P35125 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
USP6P35125 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP6P35125 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP6P35125 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP6P35125 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP6P35125 UXT-AS1-201ENST00000590504 1525 ntBASIC23.07■■□□□ 1.28
USP6P35125 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP6P35125 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP6P35125 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC23.07■■□□□ 1.28
USP6P35125 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP6P35125 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC23.07■■□□□ 1.28
USP6P35125 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC23.07■■□□□ 1.28
USP6P35125 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP6P35125 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP6P35125 TREML5P-201ENST00000421694 576 ntBASIC23.07■■□□□ 1.28
USP6P35125 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC23.07■■□□□ 1.28
USP6P35125 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC23.07■■□□□ 1.28
USP6P35125 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC23.07■■□□□ 1.28
USP6P35125 IGHV3-62-201ENST00000520057 340 ntBASIC23.07■■□□□ 1.28
USP6P35125 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
USP6P35125 SLC25A39P2-201ENST00000537614 270 ntBASIC23.07■■□□□ 1.28
USP6P35125 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC23.07■■□□□ 1.28
USP6P35125 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC23.07■■□□□ 1.28
USP6P35125 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC23.07■■□□□ 1.28
USP6P35125 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
USP6P35125 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
USP6P35125 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC23.07■■□□□ 1.28
USP6P35125 GNAS-203ENST00000306120 1878 ntBASIC23.07■■□□□ 1.28
USP6P35125 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
USP6P35125 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 FO538757.1-201ENST00000623083 1397 ntBASIC23.06■■□□□ 1.28
USP6P35125 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC23.06■■□□□ 1.28
USP6P35125 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC23.06■■□□□ 1.28
USP6P35125 AC016027.1-202ENST00000607927 1699 ntBASIC23.06■■□□□ 1.28
USP6P35125 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 HARS-204ENST00000438307 1789 ntTSL 2 BASIC23.06■■□□□ 1.28
USP6P35125 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
USP6P35125 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC23.06■■□□□ 1.28
USP6P35125 CD276-201ENST00000318424 2738 ntTSL 5 BASIC23.06■■□□□ 1.28
USP6P35125 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC23.06■■□□□ 1.28
USP6P35125 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
USP6P35125 VMA21-202ENST00000370361 693 ntTSL 5 BASIC23.06■■□□□ 1.28
USP6P35125 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 CCDC74BP1-201ENST00000508880 1123 ntBASIC23.06■■□□□ 1.28
USP6P35125 YTHDF3-AS1-201ENST00000603538 718 ntBASIC23.06■■□□□ 1.28
USP6P35125 AL158211.3-201ENST00000607385 239 ntBASIC23.06■■□□□ 1.28
USP6P35125 AC008267.7-201ENST00000624570 1194 ntBASIC23.06■■□□□ 1.28
USP6P35125 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
USP6P35125 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6P35125 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.05■■□□□ 1.28
USP6P35125 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6P35125 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
USP6P35125 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6P35125 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6P35125 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6P35125 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC23.05■■□□□ 1.28
USP6P35125 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC23.05■■□□□ 1.28
USP6P35125 PPP6R2P1-201ENST00000450880 1275 ntBASIC23.05■■□□□ 1.28
USP6P35125 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
USP6P35125 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6P35125 AC087641.1-201ENST00000557561 1021 ntBASIC23.05■■□□□ 1.28
USP6P35125 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
USP6P35125 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6P35125 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6P35125 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP6P35125 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP6P35125 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6P35125 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC23.04■■□□□ 1.28
USP6P35125 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP6P35125 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP6P35125 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP6P35125 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC23.04■■□□□ 1.28
USP6P35125 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC23.04■■□□□ 1.28
USP6P35125 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC23.04■■□□□ 1.28
USP6P35125 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP6P35125 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP6P35125 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP6P35125 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP6P35125 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP6P35125 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC23.04■■□□□ 1.28
USP6P35125 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC23.04■■□□□ 1.28
USP6P35125 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC23.04■■□□□ 1.28
USP6P35125 MIR6080-201ENST00000617359 66 ntBASIC23.04■■□□□ 1.28
USP6P35125 HFE2-206ENST00000634927 506 ntTSL 4 BASIC23.04■■□□□ 1.28
USP6P35125 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC23.04■■□□□ 1.28
USP6P35125 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms