Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 KRT89P-201ENST00000620027 1478 ntBASIC16.58■□□□□ 0.24
HTR1EP28566 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HTR1EP28566 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.57■□□□□ 0.24
HTR1EP28566 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HTR1EP28566 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 PCDH8P1-201ENST00000428983 2773 ntBASIC16.57■□□□□ 0.24
HTR1EP28566 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HTR1EP28566 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.57■□□□□ 0.24
HTR1EP28566 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HTR1EP28566 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.57■□□□□ 0.24
HTR1EP28566 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.57■□□□□ 0.24
HTR1EP28566 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.57■□□□□ 0.24
HTR1EP28566 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.57■□□□□ 0.24
HTR1EP28566 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 AC079776.4-201ENST00000511039 504 ntBASIC16.57■□□□□ 0.24
HTR1EP28566 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.57■□□□□ 0.24
HTR1EP28566 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.57■□□□□ 0.24
HTR1EP28566 AC104692.2-201ENST00000603054 253 ntBASIC16.57■□□□□ 0.24
HTR1EP28566 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HTR1EP28566 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
HTR1EP28566 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.57■□□□□ 0.24
HTR1EP28566 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1EP28566 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
HTR1EP28566 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HTR1EP28566 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.56■□□□□ 0.24
HTR1EP28566 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
HTR1EP28566 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.56■□□□□ 0.24
HTR1EP28566 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.56■□□□□ 0.24
HTR1EP28566 TSPY22P-201ENST00000427496 604 ntBASIC16.56■□□□□ 0.24
HTR1EP28566 LINC00265-3P-201ENST00000447588 903 ntBASIC16.56■□□□□ 0.24
HTR1EP28566 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.56■□□□□ 0.24
HTR1EP28566 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HTR1EP28566 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HTR1EP28566 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.56■□□□□ 0.24
HTR1EP28566 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.56■□□□□ 0.24
HTR1EP28566 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.56■□□□□ 0.24
HTR1EP28566 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HTR1EP28566 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HTR1EP28566 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.56■□□□□ 0.24
HTR1EP28566 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.56■□□□□ 0.24
HTR1EP28566 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HTR1EP28566 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HTR1EP28566 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HTR1EP28566 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTR1EP28566 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.56■□□□□ 0.24
HTR1EP28566 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.56■□□□□ 0.24
HTR1EP28566 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.55■□□□□ 0.24
HTR1EP28566 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HTR1EP28566 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.55■□□□□ 0.24
HTR1EP28566 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.55■□□□□ 0.24
HTR1EP28566 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
HTR1EP28566 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.55■□□□□ 0.24
HTR1EP28566 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms