Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH3P22223 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH3P22223 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDH3P22223 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH3P22223 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH3P22223 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH3P22223 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CDH3P22223 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH3P22223 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH3P22223 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH3P22223 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDH3P22223 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH3P22223 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDH3P22223 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH3P22223 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CDH3P22223 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH3P22223 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDH3P22223 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDH3P22223 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH3P22223 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CDH3P22223 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CDH3P22223 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH3P22223 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
CDH3P22223 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDH3P22223 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH3P22223 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH3P22223 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH3P22223 AP000867.4-201ENST00000641616 219 ntBASIC16.97■□□□□ 0.31
CDH3P22223 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH3P22223 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CDH3P22223 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDH3P22223 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH3P22223 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH3P22223 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH3P22223 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDH3P22223 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH3P22223 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH3P22223 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH3P22223 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH3P22223 AC134043.2-201ENST00000624206 2238 ntBASIC16.96■□□□□ 0.31
CDH3P22223 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH3P22223 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH3P22223 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDH3P22223 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH3P22223 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH3P22223 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH3P22223 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH3P22223 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH3P22223 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH3P22223 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH3P22223 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH3P22223 RNPS1P1-201ENST00000507437 918 ntBASIC16.96■□□□□ 0.31
CDH3P22223 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH3P22223 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.96■□□□□ 0.31
CDH3P22223 SART3-203ENST00000546611 1184 ntBASIC16.96■□□□□ 0.31
CDH3P22223 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH3P22223 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH3P22223 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH3P22223 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH3P22223 AP001005.1-201ENST00000571755 1248 ntBASIC16.96■□□□□ 0.31
CDH3P22223 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.96■□□□□ 0.31
CDH3P22223 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH3P22223 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH3P22223 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.96■□□□□ 0.31
CDH3P22223 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH3P22223 AL139288.1-201ENST00000623748 933 ntBASIC16.96■□□□□ 0.31
CDH3P22223 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH3P22223 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CDH3P22223 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDH3P22223 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH3P22223 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CDH3P22223 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms