Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.02■□□□□ 0.64
GAP43P17677 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.02■□□□□ 0.64
GAP43P17677 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.02■□□□□ 0.64
GAP43P17677 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.02■□□□□ 0.64
GAP43P17677 AC004706.3-202ENST00000621574 984 ntBASIC19.02■□□□□ 0.64
GAP43P17677 TP73-AS1-207ENST00000624167 988 ntBASIC19.02■□□□□ 0.64
GAP43P17677 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.02■□□□□ 0.64
GAP43P17677 AC107918.4-202ENST00000641623 219 ntBASIC19.02■□□□□ 0.64
GAP43P17677 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
GAP43P17677 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.02■□□□□ 0.63
GAP43P17677 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
GAP43P17677 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
GAP43P17677 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.02■□□□□ 0.63
GAP43P17677 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GAP43P17677 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.02■□□□□ 0.63
GAP43P17677 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
GAP43P17677 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GAP43P17677 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.02■□□□□ 0.63
GAP43P17677 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
GAP43P17677 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
GAP43P17677 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
GAP43P17677 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
GAP43P17677 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
GAP43P17677 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.01■□□□□ 0.63
GAP43P17677 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.01■□□□□ 0.63
GAP43P17677 AL121761.2-201ENST00000598007 1648 ntBASIC19.01■□□□□ 0.63
GAP43P17677 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
GAP43P17677 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.01■□□□□ 0.63
GAP43P17677 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.01■□□□□ 0.63
GAP43P17677 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GAP43P17677 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.01■□□□□ 0.63
GAP43P17677 FAM197Y8-203ENST00000450145 560 ntBASIC19.01■□□□□ 0.63
GAP43P17677 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.01■□□□□ 0.63
GAP43P17677 RNPS1P1-201ENST00000507437 918 ntBASIC19.01■□□□□ 0.63
GAP43P17677 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.01■□□□□ 0.63
GAP43P17677 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.01■□□□□ 0.63
GAP43P17677 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.01■□□□□ 0.63
GAP43P17677 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAP43P17677 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GAP43P17677 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 FRMD8P1-201ENST00000440433 1524 ntBASIC19■□□□□ 0.63
GAP43P17677 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
GAP43P17677 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
GAP43P17677 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
GAP43P17677 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
GAP43P17677 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19■□□□□ 0.63
GAP43P17677 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19■□□□□ 0.63
GAP43P17677 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19■□□□□ 0.63
GAP43P17677 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19■□□□□ 0.63
GAP43P17677 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19■□□□□ 0.63
GAP43P17677 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19■□□□□ 0.63
GAP43P17677 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
GAP43P17677 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19■□□□□ 0.63
GAP43P17677 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19■□□□□ 0.63
GAP43P17677 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19■□□□□ 0.63
GAP43P17677 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19■□□□□ 0.63
GAP43P17677 AC006557.2-201ENST00000592985 1240 ntBASIC19■□□□□ 0.63
GAP43P17677 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19■□□□□ 0.63
GAP43P17677 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19■□□□□ 0.63
GAP43P17677 AC092053.1-201ENST00000605787 1936 ntBASIC19■□□□□ 0.63
GAP43P17677 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19■□□□□ 0.63
GAP43P17677 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms