Protein–RNA interactions for Protein: P16452

EPB42, Erythrocyte membrane protein band 4.2, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42P16452 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
EPB42P16452 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.86■□□□□ 0.29
EPB42P16452 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
EPB42P16452 INTS4P1-201ENST00000438455 1935 ntBASIC16.86■□□□□ 0.29
EPB42P16452 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPB42P16452 AC060834.1-201ENST00000443027 2032 ntBASIC16.86■□□□□ 0.29
EPB42P16452 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.85■□□□□ 0.29
EPB42P16452 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.85■□□□□ 0.29
EPB42P16452 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
EPB42P16452 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
EPB42P16452 SLC25A1P3-201ENST00000395415 828 ntBASIC16.85■□□□□ 0.29
EPB42P16452 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.85■□□□□ 0.29
EPB42P16452 AC104819.1-201ENST00000504587 486 ntBASIC16.85■□□□□ 0.29
EPB42P16452 AC074051.2-201ENST00000565115 352 ntBASIC16.85■□□□□ 0.29
EPB42P16452 BNIP3P18-201ENST00000593976 575 ntBASIC16.85■□□□□ 0.29
EPB42P16452 AC091076.1-201ENST00000610741 619 ntBASIC16.85■□□□□ 0.29
EPB42P16452 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
EPB42P16452 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.85■□□□□ 0.29
EPB42P16452 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
EPB42P16452 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.85■□□□□ 0.29
EPB42P16452 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
EPB42P16452 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
EPB42P16452 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
EPB42P16452 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPB42P16452 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.84■□□□□ 0.29
EPB42P16452 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
EPB42P16452 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.84■□□□□ 0.29
EPB42P16452 AC132938.5-201ENST00000624980 1813 ntBASIC16.84■□□□□ 0.29
EPB42P16452 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
EPB42P16452 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.84■□□□□ 0.29
EPB42P16452 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.84■□□□□ 0.29
EPB42P16452 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
EPB42P16452 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
EPB42P16452 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 KLF4P1-201ENST00000412782 1185 ntBASIC16.84■□□□□ 0.29
EPB42P16452 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EPB42P16452 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.84■□□□□ 0.29
EPB42P16452 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.84■□□□□ 0.29
EPB42P16452 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.84■□□□□ 0.29
EPB42P16452 AP000867.3-201ENST00000524675 377 ntBASIC16.84■□□□□ 0.29
EPB42P16452 MIR3180-1-201ENST00000580374 94 ntBASIC16.84■□□□□ 0.29
EPB42P16452 MIR3180-3-201ENST00000584616 94 ntBASIC16.84■□□□□ 0.29
EPB42P16452 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.84■□□□□ 0.29
EPB42P16452 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.84■□□□□ 0.29
EPB42P16452 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.84■□□□□ 0.29
EPB42P16452 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.84■□□□□ 0.29
EPB42P16452 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.84■□□□□ 0.29
EPB42P16452 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.84■□□□□ 0.29
EPB42P16452 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
EPB42P16452 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
EPB42P16452 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPB42P16452 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPB42P16452 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPB42P16452 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPB42P16452 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPB42P16452 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPB42P16452 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPB42P16452 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPB42P16452 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms