Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 LINC02012-201ENST00000608206 1725 ntBASIC18.72■□□□□ 0.59
CCDC172P0C7W6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 BX276092.5-203ENST00000456199 560 ntBASIC18.72■□□□□ 0.59
CCDC172P0C7W6 AL121672.3-201ENST00000608644 468 ntBASIC18.72■□□□□ 0.59
CCDC172P0C7W6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC172P0C7W6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 AC005336.2-201ENST00000593183 939 ntBASIC18.71■□□□□ 0.59
CCDC172P0C7W6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 AL049757.1-201ENST00000616842 1596 ntBASIC18.71■□□□□ 0.59
CCDC172P0C7W6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC172P0C7W6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 CHCHD2P8-201ENST00000429873 447 ntBASIC18.7■□□□□ 0.58
CCDC172P0C7W6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC172P0C7W6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC172P0C7W6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms