Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRPRAP08240 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPRAP08240 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPRAP08240 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SRPRAP08240 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPRAP08240 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.39■□□□□ 0.37
SRPRAP08240 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.39■□□□□ 0.37
SRPRAP08240 FAM185BP-201ENST00000443595 716 ntBASIC17.39■□□□□ 0.37
SRPRAP08240 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.39■□□□□ 0.37
SRPRAP08240 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.39■□□□□ 0.37
SRPRAP08240 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.39■□□□□ 0.37
SRPRAP08240 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.39■□□□□ 0.37
SRPRAP08240 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.39■□□□□ 0.37
SRPRAP08240 PDPK2P-202ENST00000562415 1191 ntBASIC17.39■□□□□ 0.37
SRPRAP08240 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.39■□□□□ 0.37
SRPRAP08240 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.39■□□□□ 0.37
SRPRAP08240 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPRAP08240 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRPRAP08240 BCAR1-209ENST00000546196 1340 ntBASIC17.39■□□□□ 0.37
SRPRAP08240 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPRAP08240 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPRAP08240 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPRAP08240 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SRPRAP08240 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SRPRAP08240 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.38■□□□□ 0.37
SRPRAP08240 SLC25A6P2-201ENST00000497974 877 ntBASIC17.38■□□□□ 0.37
SRPRAP08240 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.38■□□□□ 0.37
SRPRAP08240 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.38■□□□□ 0.37
SRPRAP08240 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
SRPRAP08240 KRT19P2-202ENST00000557173 1012 ntBASIC17.38■□□□□ 0.37
SRPRAP08240 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.38■□□□□ 0.37
SRPRAP08240 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.38■□□□□ 0.37
SRPRAP08240 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.38■□□□□ 0.37
SRPRAP08240 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SRPRAP08240 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SRPRAP08240 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRPRAP08240 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SRPRAP08240 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
SRPRAP08240 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.37■□□□□ 0.37
SRPRAP08240 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SRPRAP08240 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SRPRAP08240 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.37■□□□□ 0.37
SRPRAP08240 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.37■□□□□ 0.37
SRPRAP08240 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.37■□□□□ 0.37
SRPRAP08240 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.37■□□□□ 0.37
SRPRAP08240 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.37■□□□□ 0.37
SRPRAP08240 AC005829.1-201ENST00000570002 483 ntBASIC17.37■□□□□ 0.37
SRPRAP08240 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.37■□□□□ 0.37
SRPRAP08240 AC055717.3-201ENST00000622967 595 ntBASIC17.37■□□□□ 0.37
SRPRAP08240 C20orf181-201ENST00000623918 480 ntBASIC17.37■□□□□ 0.37
SRPRAP08240 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SRPRAP08240 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SRPRAP08240 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SRPRAP08240 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SRPRAP08240 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SRPRAP08240 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPRAP08240 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.37■□□□□ 0.37
SRPRAP08240 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRPRAP08240 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRPRAP08240 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRPRAP08240 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRPRAP08240 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.36■□□□□ 0.37
SRPRAP08240 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.36■□□□□ 0.37
SRPRAP08240 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPRAP08240 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRPRAP08240 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.36■□□□□ 0.37
SRPRAP08240 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRPRAP08240 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPRAP08240 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRPRAP08240 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.36■□□□□ 0.37
SRPRAP08240 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
SRPRAP08240 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms