Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC3P02656 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
APOC3P02656 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
APOC3P02656 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
APOC3P02656 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC3P02656 LINC02012-201ENST00000608206 1725 ntBASIC13.87□□□□□ -0.19
APOC3P02656 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.87□□□□□ -0.19
APOC3P02656 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC3P02656 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
APOC3P02656 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APOC3P02656 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
APOC3P02656 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.87□□□□□ -0.19
APOC3P02656 MIR3621-201ENST00000580529 85 ntBASIC13.87□□□□□ -0.19
APOC3P02656 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
APOC3P02656 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
APOC3P02656 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 AC092053.1-201ENST00000605787 1936 ntBASIC13.87□□□□□ -0.19
APOC3P02656 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC3P02656 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC3P02656 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
APOC3P02656 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 AC107918.4-201ENST00000641966 3141 ntBASIC13.87□□□□□ -0.19
APOC3P02656 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC3P02656 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC3P02656 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APOC3P02656 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC3P02656 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.87□□□□□ -0.19
APOC3P02656 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC3P02656 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
APOC3P02656 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC3P02656 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.86□□□□□ -0.19
APOC3P02656 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
APOC3P02656 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
APOC3P02656 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 AP000593.1-201ENST00000393668 712 ntBASIC13.86□□□□□ -0.19
APOC3P02656 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC13.86□□□□□ -0.19
APOC3P02656 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 QDPR-206ENST00000508623 601 ntTSL 3 BASIC13.86□□□□□ -0.19
APOC3P02656 AC012414.1-201ENST00000556676 535 ntBASIC13.86□□□□□ -0.19
APOC3P02656 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
APOC3P02656 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC3P02656 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC3P02656 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC3P02656 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC3P02656 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.86□□□□□ -0.19
APOC3P02656 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC3P02656 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms