Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFP01375 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TNFP01375 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFP01375 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TNFP01375 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TNFP01375 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TNFP01375 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFP01375 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TNFP01375 HTR5BP-201ENST00000430851 1154 ntBASIC16.82■□□□□ 0.28
TNFP01375 MKNK2P1-201ENST00000437526 628 ntBASIC16.82■□□□□ 0.28
TNFP01375 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
TNFP01375 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.82■□□□□ 0.28
TNFP01375 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.82■□□□□ 0.28
TNFP01375 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFP01375 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFP01375 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFP01375 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFP01375 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TNFP01375 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFP01375 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TNFP01375 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TNFP01375 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFP01375 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TNFP01375 NOC2LP1-202ENST00000452600 2235 ntBASIC16.81■□□□□ 0.28
TNFP01375 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFP01375 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFP01375 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TNFP01375 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFP01375 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 AL513480.1-201ENST00000451731 511 ntBASIC16.81■□□□□ 0.28
TNFP01375 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
TNFP01375 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFP01375 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.81■□□□□ 0.28
TNFP01375 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.81■□□□□ 0.28
TNFP01375 AP001160.2-201ENST00000596071 487 ntBASIC16.81■□□□□ 0.28
TNFP01375 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.81■□□□□ 0.28
TNFP01375 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFP01375 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFP01375 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFP01375 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TNFP01375 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFP01375 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TNFP01375 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
TNFP01375 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TNFP01375 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFP01375 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TNFP01375 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TNFP01375 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFP01375 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFP01375 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFP01375 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
TNFP01375 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.8■□□□□ 0.28
TNFP01375 ALG1L5P-201ENST00000482043 771 ntBASIC16.8■□□□□ 0.28
TNFP01375 SLC25A6P2-201ENST00000497974 877 ntBASIC16.8■□□□□ 0.28
TNFP01375 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.8■□□□□ 0.28
TNFP01375 MIR4469-201ENST00000583919 79 ntBASIC16.8■□□□□ 0.28
TNFP01375 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFP01375 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TNFP01375 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TNFP01375 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFP01375 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFP01375 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFP01375 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFP01375 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFP01375 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TNFP01375 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms