Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 AC025580.3-201ENST00000617932 1424 ntBASIC19.35■□□□□ 0.69
GGPS1O95749 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 HTR5BP-201ENST00000430851 1154 ntBASIC19.35■□□□□ 0.69
GGPS1O95749 AP006288.1-201ENST00000446065 395 ntBASIC19.35■□□□□ 0.69
GGPS1O95749 PAWRP1-201ENST00000451083 565 ntBASIC19.35■□□□□ 0.69
GGPS1O95749 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.35■□□□□ 0.69
GGPS1O95749 CXCL1P1-201ENST00000502804 216 ntBASIC19.35■□□□□ 0.69
GGPS1O95749 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
GGPS1O95749 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.35■□□□□ 0.69
GGPS1O95749 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.35■□□□□ 0.69
GGPS1O95749 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.35■□□□□ 0.69
GGPS1O95749 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.35■□□□□ 0.69
GGPS1O95749 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GGPS1O95749 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
GGPS1O95749 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
GGPS1O95749 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.34■□□□□ 0.69
GGPS1O95749 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
GGPS1O95749 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.34■□□□□ 0.69
GGPS1O95749 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.34■□□□□ 0.69
GGPS1O95749 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.34■□□□□ 0.69
GGPS1O95749 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.34■□□□□ 0.69
GGPS1O95749 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.34■□□□□ 0.69
GGPS1O95749 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.34■□□□□ 0.69
GGPS1O95749 AL596442.2-201ENST00000610240 980 ntBASIC19.34■□□□□ 0.69
GGPS1O95749 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GGPS1O95749 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.34■□□□□ 0.69
GGPS1O95749 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GGPS1O95749 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GGPS1O95749 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.34■□□□□ 0.69
GGPS1O95749 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.33■□□□□ 0.69
GGPS1O95749 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GGPS1O95749 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
GGPS1O95749 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.33■□□□□ 0.69
GGPS1O95749 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GGPS1O95749 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
GGPS1O95749 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.33■□□□□ 0.69
GGPS1O95749 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.33■□□□□ 0.69
GGPS1O95749 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GGPS1O95749 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
GGPS1O95749 HTR7P1-202ENST00000624664 4411 ntBASIC19.33■□□□□ 0.69
GGPS1O95749 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.33■□□□□ 0.69
GGPS1O95749 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GGPS1O95749 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
GGPS1O95749 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.33■□□□□ 0.68
GGPS1O95749 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GGPS1O95749 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
GGPS1O95749 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GGPS1O95749 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GGPS1O95749 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
GGPS1O95749 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.33■□□□□ 0.68
GGPS1O95749 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.33■□□□□ 0.68
GGPS1O95749 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.33■□□□□ 0.68
GGPS1O95749 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GGPS1O95749 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.33■□□□□ 0.68
GGPS1O95749 AC023141.13-201ENST00000604991 943 ntBASIC19.33■□□□□ 0.68
GGPS1O95749 AC007064.4-201ENST00000637740 555 ntBASIC19.33■□□□□ 0.68
GGPS1O95749 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GGPS1O95749 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
GGPS1O95749 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
GGPS1O95749 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.33■□□□□ 0.68
GGPS1O95749 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GGPS1O95749 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GGPS1O95749 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
GGPS1O95749 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.33■□□□□ 0.68
GGPS1O95749 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
GGPS1O95749 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
GGPS1O95749 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
GGPS1O95749 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GGPS1O95749 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GGPS1O95749 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
GGPS1O95749 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms