Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CSPG5O95196 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 TIMM8BP1-201ENST00000452384 211 ntBASIC18.53■□□□□ 0.56
CSPG5O95196 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CSPG5O95196 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.53■□□□□ 0.56
CSPG5O95196 IGHV3-52-201ENST00000519770 353 ntBASIC18.53■□□□□ 0.56
CSPG5O95196 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CSPG5O95196 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.53■□□□□ 0.56
CSPG5O95196 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.53■□□□□ 0.56
CSPG5O95196 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.53■□□□□ 0.56
CSPG5O95196 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CSPG5O95196 AC007064.4-201ENST00000637740 555 ntBASIC18.53■□□□□ 0.56
CSPG5O95196 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.53■□□□□ 0.56
CSPG5O95196 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 AL390961.4-201ENST00000623958 2535 ntBASIC18.53■□□□□ 0.56
CSPG5O95196 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CSPG5O95196 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CSPG5O95196 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG5O95196 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.52■□□□□ 0.56
CSPG5O95196 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CSPG5O95196 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG5O95196 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG5O95196 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG5O95196 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.52■□□□□ 0.56
CSPG5O95196 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG5O95196 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CSPG5O95196 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.52■□□□□ 0.56
CSPG5O95196 AC244107.1-201ENST00000442033 332 ntBASIC18.52■□□□□ 0.56
CSPG5O95196 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.52■□□□□ 0.56
CSPG5O95196 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CSPG5O95196 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.52■□□□□ 0.56
CSPG5O95196 STK25P1-201ENST00000585406 838 ntBASIC18.52■□□□□ 0.56
CSPG5O95196 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CSPG5O95196 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG5O95196 AC068137.2-201ENST00000605408 478 ntBASIC18.52■□□□□ 0.56
CSPG5O95196 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.52■□□□□ 0.56
CSPG5O95196 LINC00628-201ENST00000628516 1289 ntBASIC18.52■□□□□ 0.56
CSPG5O95196 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG5O95196 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CSPG5O95196 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG5O95196 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
CSPG5O95196 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG5O95196 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG5O95196 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG5O95196 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.52■□□□□ 0.55
CSPG5O95196 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG5O95196 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG5O95196 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG5O95196 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG5O95196 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.51■□□□□ 0.55
CSPG5O95196 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.51■□□□□ 0.55
CSPG5O95196 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.51■□□□□ 0.55
CSPG5O95196 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.51■□□□□ 0.55
CSPG5O95196 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.51■□□□□ 0.55
CSPG5O95196 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CSPG5O95196 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CSPG5O95196 PCDHB18P-201ENST00000524813 2368 ntBASIC18.51■□□□□ 0.55
CSPG5O95196 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 AP002414.1-201ENST00000391405 1147 ntBASIC18.51■□□□□ 0.55
CSPG5O95196 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.51■□□□□ 0.55
CSPG5O95196 RHOQP3-201ENST00000437982 621 ntBASIC18.51■□□□□ 0.55
CSPG5O95196 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.51■□□□□ 0.55
CSPG5O95196 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CSPG5O95196 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 AC069262.1-201ENST00000539058 672 ntBASIC18.51■□□□□ 0.55
CSPG5O95196 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.51■□□□□ 0.55
CSPG5O95196 MIR4745-201ENST00000577608 62 ntBASIC18.51■□□□□ 0.55
CSPG5O95196 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.51■□□□□ 0.55
CSPG5O95196 AL353135.1-201ENST00000606729 504 ntBASIC18.51■□□□□ 0.55
CSPG5O95196 AL513210.1-201ENST00000629608 234 ntBASIC18.51■□□□□ 0.55
CSPG5O95196 AC105339.1-204ENST00000636249 355 ntBASIC18.51■□□□□ 0.55
CSPG5O95196 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG5O95196 AC009336.1-201ENST00000608941 1553 ntBASIC18.51■□□□□ 0.55
CSPG5O95196 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.5■□□□□ 0.55
CSPG5O95196 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.5■□□□□ 0.55
CSPG5O95196 REXO1L9P-201ENST00000604264 2108 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms