Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.08■□□□□ 0.48
BEST1O76090 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.08■□□□□ 0.48
BEST1O76090 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 AC027601.4-201ENST00000611259 610 ntBASIC18.08■□□□□ 0.48
BEST1O76090 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
BEST1O76090 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.08■□□□□ 0.48
BEST1O76090 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.08■□□□□ 0.48
BEST1O76090 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.08■□□□□ 0.48
BEST1O76090 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.08■□□□□ 0.48
BEST1O76090 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
BEST1O76090 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST1O76090 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST1O76090 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
BEST1O76090 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BEST1O76090 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST1O76090 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST1O76090 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.07■□□□□ 0.48
BEST1O76090 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.07■□□□□ 0.48
BEST1O76090 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.07■□□□□ 0.48
BEST1O76090 IGLL3P-201ENST00000412472 434 ntBASIC18.07■□□□□ 0.48
BEST1O76090 MED15P5-201ENST00000423150 992 ntBASIC18.07■□□□□ 0.48
BEST1O76090 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.07■□□□□ 0.48
BEST1O76090 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
BEST1O76090 AC087163.2-201ENST00000457299 853 ntBASIC18.07■□□□□ 0.48
BEST1O76090 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.07■□□□□ 0.48
BEST1O76090 PGAM5P1-201ENST00000518923 814 ntBASIC18.07■□□□□ 0.48
BEST1O76090 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.07■□□□□ 0.48
BEST1O76090 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.07■□□□□ 0.48
BEST1O76090 AC064836.3-201ENST00000607928 673 ntBASIC18.07■□□□□ 0.48
BEST1O76090 GGTLC5P-201ENST00000617623 998 ntBASIC18.07■□□□□ 0.48
BEST1O76090 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST1O76090 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BEST1O76090 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.07■□□□□ 0.48
BEST1O76090 AC092053.1-201ENST00000605787 1936 ntBASIC18.07■□□□□ 0.48
BEST1O76090 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
BEST1O76090 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST1O76090 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.07■□□□□ 0.48
BEST1O76090 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST1O76090 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST1O76090 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BEST1O76090 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
BEST1O76090 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
BEST1O76090 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
BEST1O76090 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.06■□□□□ 0.48
BEST1O76090 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.06■□□□□ 0.48
BEST1O76090 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BEST1O76090 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 MRPL20P1-201ENST00000400819 433 ntBASIC18.06■□□□□ 0.48
BEST1O76090 CRYGEP-201ENST00000412192 528 ntBASIC18.06■□□□□ 0.48
BEST1O76090 VN2R19P-201ENST00000442399 1052 ntBASIC18.06■□□□□ 0.48
BEST1O76090 HCG4B-203ENST00000450128 991 ntBASIC18.06■□□□□ 0.48
BEST1O76090 KRT18P3-201ENST00000451602 1288 ntBASIC18.06■□□□□ 0.48
BEST1O76090 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.06■□□□□ 0.48
BEST1O76090 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.06■□□□□ 0.48
BEST1O76090 FAM197Y3-203ENST00000618346 717 ntBASIC18.06■□□□□ 0.48
BEST1O76090 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.06■□□□□ 0.48
BEST1O76090 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.06■□□□□ 0.48
BEST1O76090 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
BEST1O76090 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
BEST1O76090 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BEST1O76090 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST1O76090 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BEST1O76090 AL023806.1-201ENST00000603994 1649 ntBASIC18.05■□□□□ 0.48
BEST1O76090 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.05■□□□□ 0.48
BEST1O76090 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST1O76090 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.05■□□□□ 0.48
BEST1O76090 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BEST1O76090 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BEST1O76090 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BEST1O76090 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST1O76090 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.05■□□□□ 0.48
BEST1O76090 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST1O76090 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BEST1O76090 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.05■□□□□ 0.48
BEST1O76090 PRSS29P-201ENST00000440800 595 ntBASIC18.05■□□□□ 0.48
BEST1O76090 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.05■□□□□ 0.48
BEST1O76090 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.05■□□□□ 0.48
BEST1O76090 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.05■□□□□ 0.48
BEST1O76090 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.05■□□□□ 0.48
BEST1O76090 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.05■□□□□ 0.48
BEST1O76090 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms