Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.06■□□□□ 0
UPK1BO75841 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.06■□□□□ 0
UPK1BO75841 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.06■□□□□ 0
UPK1BO75841 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.06■□□□□ 0
UPK1BO75841 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.06■□□□□ 0
UPK1BO75841 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 NBPF21P-201ENST00000425093 1451 ntBASIC15.06■□□□□ 0
UPK1BO75841 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
UPK1BO75841 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 AC092368.3-202ENST00000574180 1591 ntBASIC15.06■□□□□ 0
UPK1BO75841 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 AC010491.1-201ENST00000563101 2797 ntBASIC15.06■□□□□ 0
UPK1BO75841 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 NORAD-201ENST00000565493 5339 ntBASIC15.06■□□□□ 0
UPK1BO75841 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.06■□□□□ 0
UPK1BO75841 AL391256.1-201ENST00000443260 1855 ntBASIC15.06■□□□□ 0
UPK1BO75841 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.06■□□□□ 0
UPK1BO75841 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1BO75841 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.05■□□□□ 0
UPK1BO75841 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.05■□□□□ 0
UPK1BO75841 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UPK1BO75841 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
UPK1BO75841 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.05■□□□□ 0
UPK1BO75841 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
UPK1BO75841 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
UPK1BO75841 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
UPK1BO75841 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.05■□□□□ 0
UPK1BO75841 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.05■□□□□ 0
UPK1BO75841 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1BO75841 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.05■□□□□ -0
UPK1BO75841 BX276092.2-201ENST00000417668 665 ntBASIC15.05■□□□□ -0
UPK1BO75841 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
UPK1BO75841 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.05■□□□□ -0
UPK1BO75841 AC137761.2-201ENST00000561729 223 ntBASIC15.05■□□□□ -0
UPK1BO75841 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.05■□□□□ -0
UPK1BO75841 AC145350.3-201ENST00000569033 163 ntBASIC15.05■□□□□ -0
UPK1BO75841 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.05■□□□□ -0
UPK1BO75841 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
UPK1BO75841 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.05■□□□□ -0
UPK1BO75841 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.05■□□□□ -0
UPK1BO75841 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
UPK1BO75841 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.05■□□□□ -0
UPK1BO75841 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.05■□□□□ -0
UPK1BO75841 HOXB1-202ENST00000577092 1414 ntBASIC15.05■□□□□ -0
UPK1BO75841 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1BO75841 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.05■□□□□ -0
UPK1BO75841 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
UPK1BO75841 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1BO75841 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1BO75841 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
UPK1BO75841 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.05■□□□□ -0
UPK1BO75841 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.05■□□□□ -0
UPK1BO75841 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1BO75841 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.05■□□□□ -0
UPK1BO75841 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1BO75841 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.05■□□□□ -0
UPK1BO75841 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.05■□□□□ -0
UPK1BO75841 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1BO75841 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.05■□□□□ -0
UPK1BO75841 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
UPK1BO75841 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UPK1BO75841 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
UPK1BO75841 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
UPK1BO75841 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.04■□□□□ -0
UPK1BO75841 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 AC023157.3-201ENST00000619086 2088 ntBASIC15.04■□□□□ -0
UPK1BO75841 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.04■□□□□ -0
UPK1BO75841 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.04■□□□□ -0
UPK1BO75841 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 LINC00167-201ENST00000530583 1419 ntBASIC15.04■□□□□ -0
UPK1BO75841 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.04■□□□□ -0
UPK1BO75841 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.04■□□□□ -0
UPK1BO75841 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
UPK1BO75841 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 AC131212.4-201ENST00000623606 975 ntBASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms