Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF253O75346 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ZNF253O75346 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF253O75346 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ZNF253O75346 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF253O75346 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
ZNF253O75346 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.52□□□□□ -0.24
ZNF253O75346 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF253O75346 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF253O75346 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
ZNF253O75346 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.52□□□□□ -0.24
ZNF253O75346 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
ZNF253O75346 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
ZNF253O75346 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.52□□□□□ -0.24
ZNF253O75346 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF253O75346 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
ZNF253O75346 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.52□□□□□ -0.24
ZNF253O75346 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF253O75346 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF253O75346 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF253O75346 AC034232.1-201ENST00000506026 1064 ntBASIC13.52□□□□□ -0.25
ZNF253O75346 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
ZNF253O75346 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 NAPSB-206ENST00000562112 1266 ntBASIC13.52□□□□□ -0.25
ZNF253O75346 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
ZNF253O75346 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF253O75346 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.52□□□□□ -0.25
ZNF253O75346 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.52□□□□□ -0.25
ZNF253O75346 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
ZNF253O75346 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.52□□□□□ -0.25
ZNF253O75346 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF253O75346 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ZNF253O75346 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ZNF253O75346 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF253O75346 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF253O75346 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
ZNF253O75346 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF253O75346 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.51□□□□□ -0.25
ZNF253O75346 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF253O75346 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF253O75346 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 AC005052.1-201ENST00000625181 2492 ntBASIC13.51□□□□□ -0.25
ZNF253O75346 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.51□□□□□ -0.25
ZNF253O75346 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF253O75346 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ZNF253O75346 AC009949.1-201ENST00000623048 1830 ntBASIC13.51□□□□□ -0.25
ZNF253O75346 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ZNF253O75346 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZNF253O75346 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.51□□□□□ -0.25
ZNF253O75346 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF253O75346 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.51□□□□□ -0.25
ZNF253O75346 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.51□□□□□ -0.25
ZNF253O75346 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
ZNF253O75346 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.51□□□□□ -0.25
ZNF253O75346 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.51□□□□□ -0.25
ZNF253O75346 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF253O75346 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
ZNF253O75346 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.51□□□□□ -0.25
ZNF253O75346 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF253O75346 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.51□□□□□ -0.25
ZNF253O75346 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.51□□□□□ -0.25
ZNF253O75346 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.51□□□□□ -0.25
ZNF253O75346 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ZNF253O75346 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF253O75346 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZNF253O75346 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF253O75346 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZNF253O75346 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF253O75346 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms