Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 NKAPP1-205ENST00000585790 367 ntBASIC16.24■□□□□ 0.19
PRAMEF2O60811 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF2O60811 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF2O60811 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 AL023806.1-201ENST00000603994 1649 ntBASIC16.23■□□□□ 0.19
PRAMEF2O60811 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 SPDYE21P-201ENST00000413323 827 ntBASIC16.23■□□□□ 0.19
PRAMEF2O60811 AL020989.1-201ENST00000422979 469 ntBASIC16.23■□□□□ 0.19
PRAMEF2O60811 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 MTDHP4-201ENST00000600287 670 ntBASIC16.23■□□□□ 0.19
PRAMEF2O60811 AC025062.2-201ENST00000605477 670 ntBASIC16.23■□□□□ 0.19
PRAMEF2O60811 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEF2O60811 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF2O60811 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 SIGLEC16-201ENST00000599858 1437 ntBASIC16.22■□□□□ 0.19
PRAMEF2O60811 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 TERC-201ENST00000602385 541 ntBASIC16.22■□□□□ 0.19
PRAMEF2O60811 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 CROCCP2-202ENST00000412962 2773 ntBASIC16.22■□□□□ 0.19
PRAMEF2O60811 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms