Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC148477.5-201ENST00000625164 1645 ntBASIC17.14■□□□□ 0.33
PCDHGA12O60330 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA12O60330 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 MIR3197-201ENST00000582241 73 ntBASIC17.13■□□□□ 0.33
PCDHGA12O60330 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 AC010654.1-201ENST00000615722 808 ntBASIC17.13■□□□□ 0.33
PCDHGA12O60330 AL513190.1-201ENST00000621254 727 ntBASIC17.13■□□□□ 0.33
PCDHGA12O60330 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 AL805961.1-202ENST00000641562 540 ntBASIC17.13■□□□□ 0.33
PCDHGA12O60330 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA12O60330 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA12O60330 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 GPR89P-201ENST00000407924 1495 ntBASIC17.12■□□□□ 0.33
PCDHGA12O60330 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 AL645939.2-201ENST00000427340 991 ntBASIC17.12■□□□□ 0.33
PCDHGA12O60330 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 AP002472.1-201ENST00000577490 586 ntBASIC17.12■□□□□ 0.33
PCDHGA12O60330 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 AC099398.1-201ENST00000567919 2776 ntBASIC17.12■□□□□ 0.33
PCDHGA12O60330 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA12O60330 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA12O60330 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms