Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 AC068418.2-201ENST00000577309 3703 ntBASIC16.91■□□□□ 0.3
PEX1O43933 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.91■□□□□ 0.3
PEX1O43933 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.9■□□□□ 0.3
PEX1O43933 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.9■□□□□ 0.3
PEX1O43933 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PEX1O43933 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PEX1O43933 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PEX1O43933 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PEX1O43933 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 LINC00554-201ENST00000564841 3011 ntBASIC16.9■□□□□ 0.3
PEX1O43933 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PEX1O43933 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.9■□□□□ 0.3
PEX1O43933 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PEX1O43933 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.9■□□□□ 0.3
PEX1O43933 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.9■□□□□ 0.3
PEX1O43933 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PEX1O43933 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 AC099343.3-201ENST00000605834 2503 ntBASIC16.9■□□□□ 0.3
PEX1O43933 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PEX1O43933 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PEX1O43933 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PEX1O43933 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PEX1O43933 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.89■□□□□ 0.3
PEX1O43933 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PEX1O43933 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.89■□□□□ 0.3
PEX1O43933 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PEX1O43933 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PEX1O43933 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.89■□□□□ 0.29
PEX1O43933 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PEX1O43933 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PEX1O43933 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.89■□□□□ 0.29
PEX1O43933 MIR3180-4-201ENST00000582223 153 ntBASIC16.89■□□□□ 0.29
PEX1O43933 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.89■□□□□ 0.29
PEX1O43933 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.89■□□□□ 0.29
PEX1O43933 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.89■□□□□ 0.29
PEX1O43933 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PEX1O43933 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.89■□□□□ 0.29
PEX1O43933 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.89■□□□□ 0.29
PEX1O43933 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEX1O43933 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEX1O43933 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEX1O43933 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEX1O43933 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PEX1O43933 AC022188.1-201ENST00000620960 1664 ntBASIC16.88■□□□□ 0.29
PEX1O43933 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEX1O43933 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PEX1O43933 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.88■□□□□ 0.29
PEX1O43933 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.88■□□□□ 0.29
PEX1O43933 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PEX1O43933 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.88■□□□□ 0.29
PEX1O43933 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEX1O43933 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEX1O43933 MIR662-201ENST00000384847 95 ntBASIC16.88■□□□□ 0.29
PEX1O43933 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.88■□□□□ 0.29
PEX1O43933 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.88■□□□□ 0.29
PEX1O43933 BX276092.5-203ENST00000456199 560 ntBASIC16.88■□□□□ 0.29
PEX1O43933 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.88■□□□□ 0.29
PEX1O43933 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.88■□□□□ 0.29
PEX1O43933 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.88■□□□□ 0.29
PEX1O43933 AL121672.3-201ENST00000608644 468 ntBASIC16.88■□□□□ 0.29
PEX1O43933 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.88■□□□□ 0.29
PEX1O43933 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PEX1O43933 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PEX1O43933 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PEX1O43933 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms