Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC093512.1-201ENST00000617969 520 ntBASIC18.38■□□□□ 0.53
HOXA2O43364 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXA2O43364 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA2O43364 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
HOXA2O43364 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HOXA2O43364 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA2O43364 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXA2O43364 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXA2O43364 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXA2O43364 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HOXA2O43364 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA2O43364 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXA2O43364 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HOXA2O43364 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXA2O43364 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXA2O43364 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXA2O43364 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 AL592309.1-201ENST00000443127 649 ntBASIC18.37■□□□□ 0.53
HOXA2O43364 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXA2O43364 AC109322.1-201ENST00000524499 1264 ntBASIC18.37■□□□□ 0.53
HOXA2O43364 SPCS2P1-201ENST00000561636 679 ntBASIC18.37■□□□□ 0.53
HOXA2O43364 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXA2O43364 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXA2O43364 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HOXA2O43364 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
HOXA2O43364 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
HOXA2O43364 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 AC133963.1-201ENST00000504166 1679 ntBASIC18.37■□□□□ 0.53
HOXA2O43364 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HOXA2O43364 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXA2O43364 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA2O43364 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXA2O43364 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXA2O43364 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HOXA2O43364 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXA2O43364 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXA2O43364 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXA2O43364 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.36■□□□□ 0.53
HOXA2O43364 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HOXA2O43364 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.36■□□□□ 0.53
HOXA2O43364 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXA2O43364 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXA2O43364 KRT8P48-201ENST00000515599 1220 ntBASIC18.36■□□□□ 0.53
HOXA2O43364 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.36■□□□□ 0.53
HOXA2O43364 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXA2O43364 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXA2O43364 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.36■□□□□ 0.53
HOXA2O43364 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXA2O43364 AC012569.1-201ENST00000591191 1524 ntBASIC18.36■□□□□ 0.53
HOXA2O43364 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HOXA2O43364 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HOXA2O43364 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HOXA2O43364 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA2O43364 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXA2O43364 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HOXA2O43364 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXA2O43364 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXA2O43364 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXA2O43364 AL353732.1-201ENST00000569618 1459 ntBASIC18.35■□□□□ 0.53
HOXA2O43364 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
HOXA2O43364 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXA2O43364 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 HCG4-201ENST00000418983 998 ntBASIC18.35■□□□□ 0.53
HOXA2O43364 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 AC079140.1-201ENST00000508039 487 ntBASIC18.35■□□□□ 0.53
HOXA2O43364 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXA2O43364 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA2O43364 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms