Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SRGAP3O43295 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SRGAP3O43295 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.41■■□□□ 1.02
SRGAP3O43295 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SRGAP3O43295 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.4■■□□□ 1.02
SRGAP3O43295 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.4■■□□□ 1.02
SRGAP3O43295 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
SRGAP3O43295 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP3O43295 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP3O43295 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
SRGAP3O43295 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP3O43295 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP3O43295 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SRGAP3O43295 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
SRGAP3O43295 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.4■■□□□ 1.02
SRGAP3O43295 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP3O43295 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SRGAP3O43295 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP3O43295 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP3O43295 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP3O43295 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.4■■□□□ 1.02
SRGAP3O43295 AP002414.1-201ENST00000391405 1147 ntBASIC21.4■■□□□ 1.02
SRGAP3O43295 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.4■■□□□ 1.02
SRGAP3O43295 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.4■■□□□ 1.02
SRGAP3O43295 RPL13AP23-201ENST00000480739 586 ntBASIC21.4■■□□□ 1.02
SRGAP3O43295 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP3O43295 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.4■■□□□ 1.02
SRGAP3O43295 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
SRGAP3O43295 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP3O43295 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP3O43295 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.4■■□□□ 1.02
SRGAP3O43295 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.4■■□□□ 1.02
SRGAP3O43295 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.4■■□□□ 1.02
SRGAP3O43295 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.4■■□□□ 1.02
SRGAP3O43295 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SRGAP3O43295 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
SRGAP3O43295 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SRGAP3O43295 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
SRGAP3O43295 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SRGAP3O43295 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
SRGAP3O43295 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
SRGAP3O43295 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.39■■□□□ 1.02
SRGAP3O43295 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SRGAP3O43295 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP3O43295 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP3O43295 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SRGAP3O43295 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP3O43295 AP000347.1-202ENST00000435868 847 ntBASIC21.39■■□□□ 1.01
SRGAP3O43295 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.39■■□□□ 1.01
SRGAP3O43295 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.39■■□□□ 1.01
SRGAP3O43295 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.39■■□□□ 1.01
SRGAP3O43295 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.39■■□□□ 1.01
SRGAP3O43295 AC008667.4-201ENST00000607370 168 ntBASIC21.39■■□□□ 1.01
SRGAP3O43295 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP3O43295 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.39■■□□□ 1.01
SRGAP3O43295 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
SRGAP3O43295 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP3O43295 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SRGAP3O43295 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP3O43295 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP3O43295 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP3O43295 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP3O43295 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP3O43295 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.39■■□□□ 1.01
SRGAP3O43295 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP3O43295 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 AC104109.2-201ENST00000602919 1418 ntBASIC21.38■■□□□ 1.01
SRGAP3O43295 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.38■■□□□ 1.01
SRGAP3O43295 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
SRGAP3O43295 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.38■■□□□ 1.01
SRGAP3O43295 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SRGAP3O43295 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.38■■□□□ 1.01
SRGAP3O43295 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.38■■□□□ 1.01
SRGAP3O43295 AL022342.1-201ENST00000400363 863 ntBASIC21.38■■□□□ 1.01
SRGAP3O43295 AC009947.1-201ENST00000444350 727 ntBASIC21.38■■□□□ 1.01
SRGAP3O43295 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 IGHV3-65-201ENST00000523210 341 ntBASIC21.38■■□□□ 1.01
SRGAP3O43295 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.38■■□□□ 1.01
SRGAP3O43295 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SRGAP3O43295 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.38■■□□□ 1.01
SRGAP3O43295 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.38■■□□□ 1.01
SRGAP3O43295 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.38■■□□□ 1.01
SRGAP3O43295 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.38■■□□□ 1.01
SRGAP3O43295 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.38■■□□□ 1.01
SRGAP3O43295 TERC-201ENST00000602385 541 ntBASIC21.38■■□□□ 1.01
SRGAP3O43295 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.38■■□□□ 1.01
SRGAP3O43295 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SRGAP3O43295 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SRGAP3O43295 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SRGAP3O43295 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms