Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PHGDHO43175 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.21■□□□□ 0.35
PHGDHO43175 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHGDHO43175 RNF216P1-203ENST00000404404 2427 ntBASIC17.21■□□□□ 0.35
PHGDHO43175 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PHGDHO43175 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHGDHO43175 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
PHGDHO43175 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PHGDHO43175 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHGDHO43175 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHGDHO43175 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHGDHO43175 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHGDHO43175 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHGDHO43175 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.21■□□□□ 0.35
PHGDHO43175 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHGDHO43175 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.21■□□□□ 0.35
PHGDHO43175 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.21■□□□□ 0.35
PHGDHO43175 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.21■□□□□ 0.35
PHGDHO43175 AC103564.2-201ENST00000432853 1299 ntBASIC17.21■□□□□ 0.35
PHGDHO43175 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.21■□□□□ 0.35
PHGDHO43175 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.21■□□□□ 0.35
PHGDHO43175 KRT18P21-201ENST00000515767 1272 ntBASIC17.21■□□□□ 0.35
PHGDHO43175 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PHGDHO43175 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.21■□□□□ 0.35
PHGDHO43175 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PHGDHO43175 AP005901.3-202ENST00000581653 237 ntBASIC17.21■□□□□ 0.35
PHGDHO43175 STK25P1-201ENST00000585406 838 ntBASIC17.21■□□□□ 0.35
PHGDHO43175 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.21■□□□□ 0.35
PHGDHO43175 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.21■□□□□ 0.35
PHGDHO43175 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHGDHO43175 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHGDHO43175 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.21■□□□□ 0.35
PHGDHO43175 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PHGDHO43175 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.21■□□□□ 0.35
PHGDHO43175 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PHGDHO43175 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.21■□□□□ 0.34
PHGDHO43175 AC005332.1-201ENST00000577698 1310 ntBASIC17.21■□□□□ 0.34
PHGDHO43175 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PHGDHO43175 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PHGDHO43175 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PHGDHO43175 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PHGDHO43175 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.2■□□□□ 0.34
PHGDHO43175 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.2■□□□□ 0.34
PHGDHO43175 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
PHGDHO43175 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.2■□□□□ 0.34
PHGDHO43175 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.2■□□□□ 0.34
PHGDHO43175 NTF6B-201ENST00000591913 560 ntBASIC17.2■□□□□ 0.34
PHGDHO43175 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.2■□□□□ 0.34
PHGDHO43175 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.2■□□□□ 0.34
PHGDHO43175 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PHGDHO43175 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PHGDHO43175 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PHGDHO43175 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PHGDHO43175 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHGDHO43175 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PHGDHO43175 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.19■□□□□ 0.34
PHGDHO43175 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.19■□□□□ 0.34
PHGDHO43175 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
PHGDHO43175 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
PHGDHO43175 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PHGDHO43175 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PHGDHO43175 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.19■□□□□ 0.34
PHGDHO43175 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.19■□□□□ 0.34
PHGDHO43175 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PHGDHO43175 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PHGDHO43175 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PHGDHO43175 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PHGDHO43175 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.19■□□□□ 0.34
PHGDHO43175 BX276092.5-203ENST00000456199 560 ntBASIC17.19■□□□□ 0.34
PHGDHO43175 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.19■□□□□ 0.34
PHGDHO43175 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.19■□□□□ 0.34
PHGDHO43175 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.19■□□□□ 0.34
PHGDHO43175 AL121956.5-201ENST00000625261 221 ntBASIC17.19■□□□□ 0.34
PHGDHO43175 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.19■□□□□ 0.34
PHGDHO43175 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms