Protein–RNA interactions for Protein: O15537

RS1, Retinoschisin, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RS1O15537 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RS1O15537 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 AC126755.1-201ENST00000525846 6405 ntBASIC12.47□□□□□ -0.41
RS1O15537 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RS1O15537 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.47□□□□□ -0.41
RS1O15537 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.47□□□□□ -0.41
RS1O15537 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RS1O15537 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 AC046185.3-201ENST00000623228 1824 ntBASIC12.47□□□□□ -0.41
RS1O15537 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
RS1O15537 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RS1O15537 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.47□□□□□ -0.41
RS1O15537 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
RS1O15537 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.47□□□□□ -0.41
RS1O15537 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.47□□□□□ -0.41
RS1O15537 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.47□□□□□ -0.41
RS1O15537 AC246785.2-201ENST00000432512 513 ntBASIC12.47□□□□□ -0.41
RS1O15537 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.47□□□□□ -0.41
RS1O15537 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.47□□□□□ -0.41
RS1O15537 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.47□□□□□ -0.41
RS1O15537 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.47□□□□□ -0.41
RS1O15537 AC005336.2-201ENST00000593183 939 ntBASIC12.47□□□□□ -0.41
RS1O15537 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.47□□□□□ -0.41
RS1O15537 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.47□□□□□ -0.41
RS1O15537 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 LINC02012-201ENST00000608206 1725 ntBASIC12.47□□□□□ -0.41
RS1O15537 AC093525.9-201ENST00000624961 1746 ntBASIC12.47□□□□□ -0.41
RS1O15537 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
RS1O15537 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RS1O15537 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.47□□□□□ -0.41
RS1O15537 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RS1O15537 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.47□□□□□ -0.41
RS1O15537 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.46□□□□□ -0.41
RS1O15537 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
RS1O15537 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
RS1O15537 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RS1O15537 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.46□□□□□ -0.41
RS1O15537 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
RS1O15537 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.46□□□□□ -0.41
RS1O15537 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.46□□□□□ -0.41
RS1O15537 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 SLC25A1P3-201ENST00000395415 828 ntBASIC12.46□□□□□ -0.41
RS1O15537 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.46□□□□□ -0.41
RS1O15537 AL845331.1-201ENST00000424978 1190 ntBASIC12.46□□□□□ -0.41
RS1O15537 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RS1O15537 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RS1O15537 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
RS1O15537 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RS1O15537 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.46□□□□□ -0.42
RS1O15537 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
RS1O15537 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RS1O15537 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RS1O15537 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RS1O15537 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
RS1O15537 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
RS1O15537 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RS1O15537 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.46□□□□□ -0.42
RS1O15537 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.46□□□□□ -0.42
RS1O15537 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RS1O15537 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.46□□□□□ -0.42
RS1O15537 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RS1O15537 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms