Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
ABCC4O15439 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ABCC4O15439 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.89■■□□□ 1.1
ABCC4O15439 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.89■■□□□ 1.1
ABCC4O15439 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ABCC4O15439 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.89■■□□□ 1.1
ABCC4O15439 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.89■■□□□ 1.1
ABCC4O15439 AC027796.2-201ENST00000575326 344 ntBASIC21.89■■□□□ 1.1
ABCC4O15439 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.89■■□□□ 1.1
ABCC4O15439 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.89■■□□□ 1.1
ABCC4O15439 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.89■■□□□ 1.1
ABCC4O15439 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ABCC4O15439 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ABCC4O15439 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ABCC4O15439 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ABCC4O15439 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
ABCC4O15439 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ABCC4O15439 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.89■■□□□ 1.09
ABCC4O15439 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
ABCC4O15439 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.89■■□□□ 1.09
ABCC4O15439 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ABCC4O15439 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.89■■□□□ 1.09
ABCC4O15439 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
ABCC4O15439 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.88■■□□□ 1.09
ABCC4O15439 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
ABCC4O15439 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.88■■□□□ 1.09
ABCC4O15439 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.88■■□□□ 1.09
ABCC4O15439 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.88■■□□□ 1.09
ABCC4O15439 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.88■■□□□ 1.09
ABCC4O15439 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.88■■□□□ 1.09
ABCC4O15439 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.88■■□□□ 1.09
ABCC4O15439 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
ABCC4O15439 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.88■■□□□ 1.09
ABCC4O15439 AC079781.4-201ENST00000641908 219 ntBASIC21.88■■□□□ 1.09
ABCC4O15439 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 AC092053.1-201ENST00000605787 1936 ntBASIC21.88■■□□□ 1.09
ABCC4O15439 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.88■■□□□ 1.09
ABCC4O15439 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCC4O15439 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.88■■□□□ 1.09
ABCC4O15439 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.87■■□□□ 1.09
ABCC4O15439 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ABCC4O15439 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.87■■□□□ 1.09
ABCC4O15439 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.87■■□□□ 1.09
ABCC4O15439 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.87■■□□□ 1.09
ABCC4O15439 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.87■■□□□ 1.09
ABCC4O15439 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.87■■□□□ 1.09
ABCC4O15439 AC060834.1-201ENST00000443027 2032 ntBASIC21.87■■□□□ 1.09
ABCC4O15439 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
ABCC4O15439 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.87■■□□□ 1.09
ABCC4O15439 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ABCC4O15439 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ABCC4O15439 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 MCCD1P2-201ENST00000423228 335 ntBASIC21.86■■□□□ 1.09
ABCC4O15439 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.86■■□□□ 1.09
ABCC4O15439 AP006288.1-201ENST00000446065 395 ntBASIC21.86■■□□□ 1.09
ABCC4O15439 AC108073.2-201ENST00000464002 357 ntBASIC21.86■■□□□ 1.09
ABCC4O15439 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.86■■□□□ 1.09
ABCC4O15439 ALG1L5P-201ENST00000482043 771 ntBASIC21.86■■□□□ 1.09
ABCC4O15439 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.86■■□□□ 1.09
ABCC4O15439 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.86■■□□□ 1.09
ABCC4O15439 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.86■■□□□ 1.09
ABCC4O15439 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.86■■□□□ 1.09
ABCC4O15439 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.86■■□□□ 1.09
ABCC4O15439 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 AL590787.1-201ENST00000568856 1315 ntBASIC21.86■■□□□ 1.09
ABCC4O15439 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
ABCC4O15439 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.86■■□□□ 1.09
ABCC4O15439 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCC4O15439 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms