Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH17O14917 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
PCDH17O14917 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH17O14917 BX640515.1-201ENST00000617215 977 ntBASIC16.54■□□□□ 0.24
PCDH17O14917 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDH17O14917 AC073592.4-201ENST00000623827 446 ntBASIC16.54■□□□□ 0.24
PCDH17O14917 TP73-AS1-207ENST00000624167 988 ntBASIC16.54■□□□□ 0.24
PCDH17O14917 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH17O14917 NKILA-202ENST00000614771 2598 ntBASIC16.54■□□□□ 0.24
PCDH17O14917 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH17O14917 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
PCDH17O14917 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 SIGLEC16-201ENST00000599858 1437 ntBASIC16.53■□□□□ 0.24
PCDH17O14917 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PCDH17O14917 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDH17O14917 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 PMPCAP1-201ENST00000508114 1576 ntBASIC16.53■□□□□ 0.24
PCDH17O14917 AL138688.1-201ENST00000624851 1594 ntBASIC16.53■□□□□ 0.24
PCDH17O14917 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDH17O14917 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDH17O14917 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 AL031284.1-201ENST00000419297 478 ntBASIC16.53■□□□□ 0.24
PCDH17O14917 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDH17O14917 PRYP5-201ENST00000451909 266 ntBASIC16.53■□□□□ 0.24
PCDH17O14917 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 RNPS1P1-201ENST00000507437 918 ntBASIC16.53■□□□□ 0.24
PCDH17O14917 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDH17O14917 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDH17O14917 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PCDH17O14917 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDH17O14917 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 AC011676.5-201ENST00000624864 2660 ntBASIC16.53■□□□□ 0.24
PCDH17O14917 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDH17O14917 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDH17O14917 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDH17O14917 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH17O14917 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.53■□□□□ 0.24
PCDH17O14917 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH17O14917 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH17O14917 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
PCDH17O14917 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDH17O14917 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH17O14917 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH17O14917 AC010460.3-201ENST00000511359 1579 ntBASIC16.52■□□□□ 0.24
PCDH17O14917 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH17O14917 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH17O14917 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH17O14917 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDH17O14917 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDH17O14917 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDH17O14917 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH17O14917 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH17O14917 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDH17O14917 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH17O14917 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH17O14917 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PCDH17O14917 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH17O14917 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH17O14917 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PCDH17O14917 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH17O14917 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH17O14917 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH17O14917 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH17O14917 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH17O14917 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH17O14917 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH17O14917 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDH17O14917 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH17O14917 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDH17O14917 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH17O14917 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH17O14917 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDH17O14917 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms