Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
CUX2O14529 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC29.16■■■□□ 2.26
CUX2O14529 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC29.16■■■□□ 2.26
CUX2O14529 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC29.16■■■□□ 2.26
CUX2O14529 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CUX2O14529 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC29.16■■■□□ 2.26
CUX2O14529 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC29.16■■■□□ 2.26
CUX2O14529 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC29.15■■■□□ 2.26
CUX2O14529 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
CUX2O14529 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
CUX2O14529 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
CUX2O14529 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 HMGA1P7-201ENST00000406908 502 ntBASIC29.15■■■□□ 2.26
CUX2O14529 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC29.15■■■□□ 2.26
CUX2O14529 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC29.15■■■□□ 2.26
CUX2O14529 AC055876.2-201ENST00000531834 546 ntBASIC29.15■■■□□ 2.26
CUX2O14529 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC29.15■■■□□ 2.26
CUX2O14529 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
CUX2O14529 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
CUX2O14529 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CUX2O14529 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC29.14■■■□□ 2.26
CUX2O14529 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CUX2O14529 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC29.14■■■□□ 2.26
CUX2O14529 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC29.14■■■□□ 2.26
CUX2O14529 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CUX2O14529 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC29.14■■■□□ 2.26
CUX2O14529 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC29.14■■■□□ 2.26
CUX2O14529 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
CUX2O14529 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC29.14■■■□□ 2.26
CUX2O14529 MIR3615-201ENST00000581999 87 ntBASIC29.14■■■□□ 2.26
CUX2O14529 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC29.14■■■□□ 2.26
CUX2O14529 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC29.14■■■□□ 2.26
CUX2O14529 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC29.14■■■□□ 2.25
CUX2O14529 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CUX2O14529 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CUX2O14529 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
CUX2O14529 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC29.13■■■□□ 2.25
CUX2O14529 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
CUX2O14529 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC29.13■■■□□ 2.25
CUX2O14529 STX1A-203ENST00000395155 783 ntTSL 2 BASIC29.13■■■□□ 2.25
CUX2O14529 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC29.13■■■□□ 2.25
CUX2O14529 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC29.13■■■□□ 2.25
CUX2O14529 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC29.13■■■□□ 2.25
CUX2O14529 ZNF767P-206ENST00000513792 565 ntBASIC29.13■■■□□ 2.25
CUX2O14529 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
CUX2O14529 EMC4-209ENST00000559421 497 ntTSL 2 BASIC29.13■■■□□ 2.25
CUX2O14529 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC29.13■■■□□ 2.25
CUX2O14529 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC29.13■■■□□ 2.25
CUX2O14529 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
CUX2O14529 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CUX2O14529 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CUX2O14529 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC29.13■■■□□ 2.25
CUX2O14529 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
CUX2O14529 AL096828.2-201ENST00000567259 1965 ntBASIC29.12■■■□□ 2.25
CUX2O14529 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CUX2O14529 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC29.12■■■□□ 2.25
CUX2O14529 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC29.12■■■□□ 2.25
CUX2O14529 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC29.12■■■□□ 2.25
CUX2O14529 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC29.12■■■□□ 2.25
CUX2O14529 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
CUX2O14529 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CUX2O14529 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
CUX2O14529 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
CUX2O14529 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
CUX2O14529 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC29.12■■■□□ 2.25
CUX2O14529 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
CUX2O14529 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CUX2O14529 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CUX2O14529 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC29.11■■■□□ 2.25
CUX2O14529 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CUX2O14529 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CUX2O14529 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CUX2O14529 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC29.11■■■□□ 2.25
CUX2O14529 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC29.11■■■□□ 2.25
CUX2O14529 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC29.11■■■□□ 2.25
CUX2O14529 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CUX2O14529 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC29.11■■■□□ 2.25
CUX2O14529 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC29.11■■■□□ 2.25
CUX2O14529 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CUX2O14529 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CUX2O14529 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CUX2O14529 BRWD1P1-201ENST00000401091 371 ntBASIC29.1■■■□□ 2.25
CUX2O14529 GPAA1P2-201ENST00000417923 928 ntBASIC29.1■■■□□ 2.25
CUX2O14529 AC142381.1-201ENST00000426099 345 ntBASIC29.1■■■□□ 2.25
CUX2O14529 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CUX2O14529 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
CUX2O14529 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC29.1■■■□□ 2.25
CUX2O14529 AC009949.1-201ENST00000623048 1830 ntBASIC29.1■■■□□ 2.25
CUX2O14529 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC29.1■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms