Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
E2F3O00716 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.87■□□□□ 0.29
E2F3O00716 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
E2F3O00716 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
E2F3O00716 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
E2F3O00716 AC124067.4-201ENST00000519691 2379 ntBASIC16.86■□□□□ 0.29
E2F3O00716 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.86■□□□□ 0.29
E2F3O00716 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
E2F3O00716 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
E2F3O00716 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.86■□□□□ 0.29
E2F3O00716 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.86■□□□□ 0.29
E2F3O00716 LINC00265-3P-201ENST00000447588 903 ntBASIC16.86■□□□□ 0.29
E2F3O00716 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 STK19B-204ENST00000512515 211 ntBASIC16.86■□□□□ 0.29
E2F3O00716 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.86■□□□□ 0.29
E2F3O00716 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.86■□□□□ 0.29
E2F3O00716 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.86■□□□□ 0.29
E2F3O00716 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.86■□□□□ 0.29
E2F3O00716 Z69720.1-201ENST00000601483 472 ntBASIC16.86■□□□□ 0.29
E2F3O00716 AC104692.2-201ENST00000603054 253 ntBASIC16.86■□□□□ 0.29
E2F3O00716 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.86■□□□□ 0.29
E2F3O00716 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
E2F3O00716 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
E2F3O00716 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
E2F3O00716 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
E2F3O00716 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 EGFEM1P-202ENST00000431685 1563 ntBASIC16.85■□□□□ 0.29
E2F3O00716 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
E2F3O00716 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
E2F3O00716 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 AC003669.1-201ENST00000334569 611 ntBASIC16.85■□□□□ 0.29
E2F3O00716 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.85■□□□□ 0.29
E2F3O00716 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.85■□□□□ 0.29
E2F3O00716 TOB2P1-201ENST00000469761 992 ntBASIC16.85■□□□□ 0.29
E2F3O00716 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.85■□□□□ 0.29
E2F3O00716 AP000867.3-201ENST00000524675 377 ntBASIC16.85■□□□□ 0.29
E2F3O00716 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.85■□□□□ 0.29
E2F3O00716 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.85■□□□□ 0.29
E2F3O00716 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.85■□□□□ 0.29
E2F3O00716 BNIP3P18-201ENST00000593976 575 ntBASIC16.85■□□□□ 0.29
E2F3O00716 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
E2F3O00716 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 INTS4P1-201ENST00000438455 1935 ntBASIC16.85■□□□□ 0.29
E2F3O00716 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.85■□□□□ 0.29
E2F3O00716 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.85■□□□□ 0.29
E2F3O00716 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
E2F3O00716 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.85■□□□□ 0.29
E2F3O00716 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
E2F3O00716 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
E2F3O00716 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.85■□□□□ 0.29
E2F3O00716 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.84■□□□□ 0.29
E2F3O00716 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.84■□□□□ 0.29
E2F3O00716 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.84■□□□□ 0.29
E2F3O00716 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.84■□□□□ 0.29
E2F3O00716 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.84■□□□□ 0.29
E2F3O00716 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.84■□□□□ 0.29
E2F3O00716 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.84■□□□□ 0.29
E2F3O00716 AC079781.3-201ENST00000449110 356 ntBASIC16.84■□□□□ 0.29
E2F3O00716 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
E2F3O00716 AC124947.2-201ENST00000547118 1133 ntBASIC16.84■□□□□ 0.29
E2F3O00716 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.84■□□□□ 0.29
E2F3O00716 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.84■□□□□ 0.29
E2F3O00716 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.84■□□□□ 0.29
E2F3O00716 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms