Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.6■□□□□ 0.89
NFKBIEO00221 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.6■□□□□ 0.89
NFKBIEO00221 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.6■□□□□ 0.89
NFKBIEO00221 AL512384.1-201ENST00000406683 331 ntBASIC20.6■□□□□ 0.89
NFKBIEO00221 AC112492.5-201ENST00000421897 457 ntBASIC20.6■□□□□ 0.89
NFKBIEO00221 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.6■□□□□ 0.89
NFKBIEO00221 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.6■□□□□ 0.89
NFKBIEO00221 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.6■□□□□ 0.89
NFKBIEO00221 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.6■□□□□ 0.89
NFKBIEO00221 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.6■□□□□ 0.89
NFKBIEO00221 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.6■□□□□ 0.89
NFKBIEO00221 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.6■□□□□ 0.89
NFKBIEO00221 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKBIEO00221 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKBIEO00221 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKBIEO00221 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NFKBIEO00221 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NFKBIEO00221 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.6■□□□□ 0.89
NFKBIEO00221 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NFKBIEO00221 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.6■□□□□ 0.89
NFKBIEO00221 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKBIEO00221 AC087499.5-201ENST00000452760 1342 ntBASIC20.59■□□□□ 0.89
NFKBIEO00221 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKBIEO00221 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NFKBIEO00221 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKBIEO00221 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.59■□□□□ 0.89
NFKBIEO00221 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKBIEO00221 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.59■□□□□ 0.89
NFKBIEO00221 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.59■□□□□ 0.89
NFKBIEO00221 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKBIEO00221 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.59■□□□□ 0.89
NFKBIEO00221 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.59■□□□□ 0.89
NFKBIEO00221 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NFKBIEO00221 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NFKBIEO00221 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.59■□□□□ 0.89
NFKBIEO00221 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.59■□□□□ 0.89
NFKBIEO00221 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKBIEO00221 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NFKBIEO00221 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NFKBIEO00221 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKBIEO00221 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NFKBIEO00221 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NFKBIEO00221 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NFKBIEO00221 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.58■□□□□ 0.89
NFKBIEO00221 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NFKBIEO00221 MIR658-201ENST00000385210 100 ntBASIC20.58■□□□□ 0.89
NFKBIEO00221 GNAQP1-201ENST00000444815 1067 ntBASIC20.58■□□□□ 0.89
NFKBIEO00221 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NFKBIEO00221 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.58■□□□□ 0.89
NFKBIEO00221 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NFKBIEO00221 WASH4P-201ENST00000564273 1246 ntBASIC20.58■□□□□ 0.89
NFKBIEO00221 AC104794.3-201ENST00000566840 1248 ntBASIC20.58■□□□□ 0.89
NFKBIEO00221 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NFKBIEO00221 MIR6805-201ENST00000615055 62 ntBASIC20.58■□□□□ 0.89
NFKBIEO00221 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
NFKBIEO00221 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.58■□□□□ 0.88
NFKBIEO00221 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
NFKBIEO00221 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.58■□□□□ 0.88
NFKBIEO00221 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
NFKBIEO00221 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.58■□□□□ 0.88
NFKBIEO00221 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.58■□□□□ 0.88
NFKBIEO00221 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NFKBIEO00221 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NFKBIEO00221 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
NFKBIEO00221 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
NFKBIEO00221 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKBIEO00221 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKBIEO00221 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKBIEO00221 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKBIEO00221 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NFKBIEO00221 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NFKBIEO00221 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.57■□□□□ 0.88
NFKBIEO00221 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.57■□□□□ 0.88
NFKBIEO00221 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.57■□□□□ 0.88
NFKBIEO00221 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.57■□□□□ 0.88
NFKBIEO00221 AC105233.2-201ENST00000523697 349 ntBASIC20.57■□□□□ 0.88
NFKBIEO00221 AF228730.5-201ENST00000530288 346 ntBASIC20.57■□□□□ 0.88
NFKBIEO00221 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.57■□□□□ 0.88
NFKBIEO00221 AC073389.1-201ENST00000595595 795 ntBASIC20.57■□□□□ 0.88
NFKBIEO00221 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NFKBIEO00221 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NFKBIEO00221 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.57■□□□□ 0.88
NFKBIEO00221 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NFKBIEO00221 FOXO1B-201ENST00000504678 1527 ntBASIC20.57■□□□□ 0.88
NFKBIEO00221 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NFKBIEO00221 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.57■□□□□ 0.88
NFKBIEO00221 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKBIEO00221 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKBIEO00221 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NFKBIEO00221 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NFKBIEO00221 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKBIEO00221 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NFKBIEO00221 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NFKBIEO00221 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKBIEO00221 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKBIEO00221 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKBIEO00221 RN7SL752P-201ENST00000463779 287 ntBASIC20.56■□□□□ 0.88
NFKBIEO00221 AC004790.1-201ENST00000612686 536 ntBASIC20.56■□□□□ 0.88
NFKBIEO00221 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NFKBIEO00221 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms