Protein–RNA interactions for Protein: H3BV60

TGFBR3L, Transforming growth factor-beta receptor type 3-like protein, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3LH3BV60 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 DUX4L17-201ENST00000557360 1267 ntBASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 AC004790.2-201ENST00000623588 572 ntBASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 AC060834.1-201ENST00000443027 2032 ntBASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TGFBR3LH3BV60 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 AC080080.1-201ENST00000625121 2420 ntBASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 SLC25A6P2-201ENST00000497974 877 ntBASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 AC106730.1-201ENST00000566722 1090 ntBASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TGFBR3LH3BV60 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 AC087163.2-201ENST00000457299 853 ntBASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TGFBR3LH3BV60 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TGFBR3LH3BV60 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TGFBR3LH3BV60 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TGFBR3LH3BV60 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TGFBR3LH3BV60 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TGFBR3LH3BV60 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
TGFBR3LH3BV60 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.02■□□□□ 0.15
TGFBR3LH3BV60 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TGFBR3LH3BV60 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TGFBR3LH3BV60 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TGFBR3LH3BV60 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms