Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 PAWRP1-201ENST00000451083 565 ntBASIC19.98■□□□□ 0.79
USP17L11C9JVI0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 NOC2LP2-201ENST00000407594 1944 ntBASIC19.98■□□□□ 0.79
USP17L11C9JVI0 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP17L11C9JVI0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP17L11C9JVI0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 AL513480.1-201ENST00000451731 511 ntBASIC19.96■□□□□ 0.79
USP17L11C9JVI0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 ACTL9-202ENST00000612068 1252 ntBASIC19.96■□□□□ 0.79
USP17L11C9JVI0 AL139327.4-201ENST00000612362 153 ntBASIC19.96■□□□□ 0.79
USP17L11C9JVI0 REXO1L3P-201ENST00000622202 1288 ntBASIC19.96■□□□□ 0.79
USP17L11C9JVI0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 AL513210.1-201ENST00000629608 234 ntBASIC19.96■□□□□ 0.79
USP17L11C9JVI0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.96■□□□□ 0.79
USP17L11C9JVI0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.79
USP17L11C9JVI0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 TSEN15P1-201ENST00000423257 515 ntBASIC19.95■□□□□ 0.78
USP17L11C9JVI0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 AC004835.2-201ENST00000603762 682 ntBASIC19.95■□□□□ 0.78
USP17L11C9JVI0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 AC105339.1-204ENST00000636249 355 ntBASIC19.95■□□□□ 0.78
USP17L11C9JVI0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP17L11C9JVI0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 SLC25A6P2-201ENST00000497974 877 ntBASIC19.94■□□□□ 0.78
USP17L11C9JVI0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.94■□□□□ 0.78
USP17L11C9JVI0 AC106028.4-201ENST00000614509 607 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms