Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 AL773604.1-201ENST00000617417 272 ntBASIC17.93■□□□□ 0.46
SRRM3A6NNA2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRRM3A6NNA2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 AKR1C7P-201ENST00000305623 895 ntBASIC17.92■□□□□ 0.46
SRRM3A6NNA2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 MIR149-201ENST00000384879 89 ntBASIC17.92■□□□□ 0.46
SRRM3A6NNA2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.92■□□□□ 0.46
SRRM3A6NNA2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 AC009102.3-201ENST00000623118 1491 ntBASIC17.92■□□□□ 0.46
SRRM3A6NNA2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 AC116353.5-201ENST00000638148 1699 ntBASIC17.92■□□□□ 0.46
SRRM3A6NNA2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRRM3A6NNA2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 AC244107.1-201ENST00000442033 332 ntBASIC17.91■□□□□ 0.46
SRRM3A6NNA2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRRM3A6NNA2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms