Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 MIR3909-201ENST00000579518 119 ntBASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 MTND6P24-201ENST00000440466 518 ntBASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
TMEM88BA6NKF7 AL353732.1-201ENST00000569618 1459 ntBASIC19.83■□□□□ 0.76
TMEM88BA6NKF7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TMEM88BA6NKF7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM88BA6NKF7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.83■□□□□ 0.76
TMEM88BA6NKF7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM88BA6NKF7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM88BA6NKF7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.83■□□□□ 0.76
TMEM88BA6NKF7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TMEM88BA6NKF7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 TMEM14DP-201ENST00000422205 345 ntBASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 AL353705.2-201ENST00000428243 662 ntBASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 AC020907.1-201ENST00000616460 1350 ntBASIC19.82■□□□□ 0.76
TMEM88BA6NKF7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 AC104989.1-201ENST00000519711 778 ntBASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 ZNF890P-202ENST00000530367 1156 ntBASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 AC103810.3-201ENST00000583567 96 ntBASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 SLC7A15P-201ENST00000424028 1363 ntBASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 AL096828.2-201ENST00000567259 1965 ntBASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 AC126763.1-201ENST00000552015 2118 ntBASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM88BA6NKF7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 AC005332.7-201ENST00000614046 2005 ntBASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms