Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC162PA2VCL2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC162PA2VCL2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC162PA2VCL2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC162PA2VCL2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 AP005117.1-201ENST00000584346 1413 ntBASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 LINC02012-201ENST00000608206 1725 ntBASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 TSPY19P-201ENST00000418461 509 ntBASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 TSPY18P-201ENST00000441642 509 ntBASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 SIGLEC30P-201ENST00000455569 941 ntBASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 KRT18P31-201ENST00000506277 1292 ntBASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 PRELID1P1-202ENST00000567272 903 ntBASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 AL121772.3-201ENST00000610840 674 ntBASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC162PA2VCL2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 AC012313.10-201ENST00000623509 926 ntBASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 AC060834.1-201ENST00000443027 2032 ntBASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 AC079776.2-201ENST00000641154 1609 ntBASIC17.29■□□□□ 0.36
CCDC162PA2VCL2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 AC092053.1-201ENST00000605787 1936 ntBASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 AC073592.4-201ENST00000623827 446 ntBASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms