Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AC091167.2-201ENST00000579581 588 ntBASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 AC093028.1-201ENST00000622998 982 ntBASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 TIMM8BP1-201ENST00000452384 211 ntBASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC144AA2RUR9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 TOP3BP1-201ENST00000420768 1380 ntBASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 HCG4-201ENST00000418983 998 ntBASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 RN7SL589P-201ENST00000481268 310 ntBASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 KRT8P48-201ENST00000515599 1220 ntBASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 AC026120.1-201ENST00000611536 926 ntBASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 AC009093.7-201ENST00000623853 1223 ntBASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CCDC144AA2RUR9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 AC012569.1-201ENST00000591191 1524 ntBASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 AC093520.2-201ENST00000561830 333 ntBASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 AL135744.1-201ENST00000565098 629 ntBASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 CD7-202ENST00000578509 925 ntTSL 3 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 AL009183.1-201ENST00000603760 355 ntBASIC24.58■■□□□ 1.53
CCDC144AA2RUR9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
CCDC144AA2RUR9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC24.58■■□□□ 1.52
CCDC144AA2RUR9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 FRMD8P1-201ENST00000440433 1524 ntBASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 AL627223.1-201ENST00000416693 442 ntBASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 AC109635.5-201ENST00000533593 962 ntBASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 RARRES2P8-201ENST00000566335 367 ntBASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC24.57■■□□□ 1.52
CCDC144AA2RUR9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms