Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 GPR89P-201ENST00000407924 1495 ntBASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 AC021087.4-201ENST00000563761 564 ntBASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 AL353135.1-201ENST00000606729 504 ntBASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC196A0A1B0GTZ2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC196A0A1B0GTZ2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC196A0A1B0GTZ2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC196A0A1B0GTZ2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC196A0A1B0GTZ2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
CCDC196A0A1B0GTZ2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC196A0A1B0GTZ2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC196A0A1B0GTZ2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC073648.2-201ENST00000510116 352 ntBASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC064862.7-201ENST00000604520 867 ntBASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC196A0A1B0GTZ2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC124947.2-201ENST00000547118 1133 ntBASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC025062.2-201ENST00000605477 670 ntBASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC196A0A1B0GTZ2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 LAGE3P1-201ENST00000425356 484 ntBASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 AL139424.1-201ENST00000607572 797 ntBASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms