Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 AC007967.3-201ENST00000434308 558 ntBASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 AC140113.2-201ENST00000604370 208 ntBASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC3AQ9Y2H6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.71■□□□□ 0.42
FNDC3AQ9Y2H6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
FNDC3AQ9Y2H6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 MED15P5-201ENST00000423150 992 ntBASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 SLC25A6P5-201ENST00000435663 894 ntBASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 AL356488.2-201ENST00000602755 427 ntBASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 AL691403.2-201ENST00000618460 490 ntBASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 SIRPAP1-201ENST00000448467 1770 ntBASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC3AQ9Y2H6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 HLA-J-201ENST00000462773 1622 ntBASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 AC098831.1-202ENST00000438821 336 ntBASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 ABCD1P5-201ENST00000445663 754 ntBASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 AC092910.1-201ENST00000482027 1129 ntBASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 AC012640.2-201ENST00000561606 901 ntBASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms