Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AP002414.1-201ENST00000391405 1147 ntBASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 AC106820.2-201ENST00000563775 3264 ntBASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHGC3Q9UN70 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHGC3Q9UN70 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 RN7SL510P-201ENST00000581311 263 ntBASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 AL691432.3-201ENST00000621860 400 ntBASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 TP73-AS1-207ENST00000624167 988 ntBASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 AC107918.4-202ENST00000641623 219 ntBASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGC3Q9UN70 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 LAGE3P1-201ENST00000425356 484 ntBASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 KRT126P-201ENST00000549467 1181 ntBASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC3Q9UN70 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGC3Q9UN70 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms