Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 CXCL1P1-201ENST00000502804 216 ntBASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 PDPK2P-202ENST00000562415 1191 ntBASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 PP12613-201ENST00000424958 2230 ntBASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 KRT19P2-202ENST00000557173 1012 ntBASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 AC005829.1-201ENST00000570002 483 ntBASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 AC007064.4-201ENST00000637740 555 ntBASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 PCDHB18P-201ENST00000524813 2368 ntBASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DENND2AQ9ULE3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 AC004967.1-201ENST00000453589 447 ntBASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 AC087163.2-201ENST00000457299 853 ntBASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 AC023141.13-201ENST00000604991 943 ntBASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 C20orf181-201ENST00000623918 480 ntBASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
DENND2AQ9ULE3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 FAM185BP-201ENST00000443595 716 ntBASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 AC092183.1-201ENST00000469884 875 ntBASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 SLC25A6P2-201ENST00000497974 877 ntBASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 AC134684.3-201ENST00000641758 218 ntBASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 AC025580.3-201ENST00000617932 1424 ntBASIC20.84■□□□□ 0.93
DENND2AQ9ULE3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms