Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 COX5BP8-201ENST00000416911 349 ntBASIC17.11■□□□□ 0.33
NCDNQ9UBB6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 AC069120.2-201ENST00000524091 540 ntBASIC17.11■□□□□ 0.33
NCDNQ9UBB6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 AC109462.3-201ENST00000573934 613 ntBASIC17.11■□□□□ 0.33
NCDNQ9UBB6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 MIR6799-201ENST00000620297 69 ntBASIC17.11■□□□□ 0.33
NCDNQ9UBB6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 AL499627.1-201ENST00000569373 2188 ntBASIC17.11■□□□□ 0.33
NCDNQ9UBB6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 HTR7P1-202ENST00000624664 4411 ntBASIC17.1■□□□□ 0.33
NCDNQ9UBB6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 GPR53P-205ENST00000457298 1084 ntBASIC17.1■□□□□ 0.33
NCDNQ9UBB6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 IGHV3-62-201ENST00000520057 340 ntBASIC17.1■□□□□ 0.33
NCDNQ9UBB6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 SPDYE22P-201ENST00000582158 798 ntBASIC17.1■□□□□ 0.33
NCDNQ9UBB6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 AC099522.2-201ENST00000607001 744 ntBASIC17.1■□□□□ 0.33
NCDNQ9UBB6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 AC104581.1-202ENST00000635932 2618 ntBASIC17.1■□□□□ 0.33
NCDNQ9UBB6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.1■□□□□ 0.33
NCDNQ9UBB6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 ARSEP1-201ENST00000420443 635 ntBASIC17.09■□□□□ 0.33
NCDNQ9UBB6 SERBP1P5-201ENST00000510079 1181 ntBASIC17.09■□□□□ 0.33
NCDNQ9UBB6 IGHV3-52-201ENST00000519770 353 ntBASIC17.09■□□□□ 0.33
NCDNQ9UBB6 IGHV3-71-201ENST00000523324 359 ntBASIC17.09■□□□□ 0.33
NCDNQ9UBB6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 AC009113.1-201ENST00000570267 2443 ntBASIC17.09■□□□□ 0.33
NCDNQ9UBB6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCDNQ9UBB6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 243 ms