Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 SLC25A1P3-201ENST00000395415 828 ntBASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 UNC93B6-202ENST00000528242 690 ntBASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 AC005593.1-201ENST00000624894 515 ntBASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 GPR89P-201ENST00000407924 1495 ntBASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPHK1Q9NYA1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.64■□□□□ 0.26
SPHK1Q9NYA1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SPHK1Q9NYA1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SPHK1Q9NYA1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 AC016396.2-201ENST00000562575 1417 ntBASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 AC104109.2-201ENST00000602919 1418 ntBASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 RPS15P9-201ENST00000494093 319 ntBASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.64■□□□□ 0.25
SPHK1Q9NYA1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 AC139713.2-201ENST00000641328 2723 ntBASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.63■□□□□ 0.25
SPHK1Q9NYA1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPHK1Q9NYA1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPHK1Q9NYA1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPHK1Q9NYA1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.62■□□□□ 0.25
SPHK1Q9NYA1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
SPHK1Q9NYA1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms