Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 AC246785.2-201ENST00000432512 513 ntBASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 AC104076.2-201ENST00000448912 469 ntBASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 AC109462.3-201ENST00000573934 613 ntBASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 AL138831.2-201ENST00000606564 490 ntBASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD1Q9NXG2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 AC046185.3-201ENST00000623228 1824 ntBASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 VENTXP7-201ENST00000475503 772 ntBASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 AL136038.3-201ENST00000561909 1096 ntBASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 AL592071.1-201ENST00000611956 408 ntBASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 IGHV3-41-201ENST00000613121 348 ntBASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 AC124864.1-201ENST00000623408 392 ntBASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 AC005915.1-201ENST00000624912 2018 ntBASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.29■□□□□ 0.2
THUMPD1Q9NXG2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 AC011498.5-201ENST00000592027 486 ntBASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms