Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 AL135999.2-201ENST00000622438 1686 ntBASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 SIGLEC30P-201ENST00000455569 941 ntBASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 AP001005.1-201ENST00000571755 1248 ntBASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 AL139288.1-201ENST00000623748 933 ntBASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 AC108860.2-201ENST00000562760 2183 ntBASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.74■□□□□ 0.27
CUEDC1Q9NWM3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 AC092865.5-201ENST00000545435 363 ntBASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUEDC1Q9NWM3 IL9RP2-201ENST00000423948 1312 ntBASIC16.72■□□□□ 0.27
CUEDC1Q9NWM3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.72■□□□□ 0.27
CUEDC1Q9NWM3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CUEDC1Q9NWM3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CUEDC1Q9NWM3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
CUEDC1Q9NWM3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CUEDC1Q9NWM3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.72■□□□□ 0.27
CUEDC1Q9NWM3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CUEDC1Q9NWM3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms