Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 MIR564-202ENST00000385049 94 ntBASIC20.25■□□□□ 0.83
RNF216Q9NWF9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 AL158053.1-201ENST00000441503 453 ntBASIC20.25■□□□□ 0.83
RNF216Q9NWF9 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 AC004232.2-201ENST00000574245 821 ntBASIC20.25■□□□□ 0.83
RNF216Q9NWF9 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 LINC01711-201ENST00000598340 967 ntBASIC20.25■□□□□ 0.83
RNF216Q9NWF9 AC079602.3-201ENST00000623931 403 ntBASIC20.25■□□□□ 0.83
RNF216Q9NWF9 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 AC099654.9-201ENST00000637055 678 ntBASIC20.25■□□□□ 0.83
RNF216Q9NWF9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 Z98044.1-201ENST00000632503 1764 ntBASIC20.25■□□□□ 0.83
RNF216Q9NWF9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 NOC2LP2-201ENST00000407594 1944 ntBASIC20.25■□□□□ 0.83
RNF216Q9NWF9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 FGL1-201ENST00000381840 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF216Q9NWF9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 USP9YP21-201ENST00000420603 432 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AL139220.1-201ENST00000436802 520 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 TMX3-202ENST00000443099 913 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC025171.2-201ENST00000451894 1218 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 ANKRD26P4-201ENST00000455755 950 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 MTCO2P6-201ENST00000463134 685 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC025572.1-201ENST00000472243 553 ntTSL 4 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 MTATP6P24-201ENST00000576835 677 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 MIR3180-1-201ENST00000580374 94 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC090616.6-201ENST00000582640 721 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 MIR3180-3-201ENST00000584616 94 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AP002414.4-201ENST00000589764 1148 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC119751.7-201ENST00000600494 245 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC079414.3-201ENST00000612986 1090 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 KRT18P1-202ENST00000452408 1331 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF216Q9NWF9 AC034236.2-201ENST00000606662 1610 ntBASIC20.24■□□□□ 0.83
RNF216Q9NWF9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 FEM1AP3-201ENST00000403722 1741 ntBASIC20.23■□□□□ 0.83
RNF216Q9NWF9 RSL24D1P1-201ENST00000404972 493 ntBASIC20.23■□□□□ 0.83
RNF216Q9NWF9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 PVRIG2P-201ENST00000435460 978 ntBASIC20.23■□□□□ 0.83
RNF216Q9NWF9 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF216Q9NWF9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms