Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC22.71■■□□□ 1.239e-6■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC22.62■■□□□ 1.219e-6■□□□□ 9.6
DROSHAQ9NRR4 MEMO1-209ENST00000490459 1242 ntTSL 222.43■■□□□ 1.189e-6■□□□□ 9.6
DROSHAQ9NRR4 SMARCD2-205ENST00000577686 394 ntTSL 322.37■■□□□ 1.179e-6■□□□□ 9.6
DROSHAQ9NRR4 CLTC-213ENST00000584313 715 ntTSL 322■■□□□ 1.119e-6■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.069e-6■□□□□ 9.6
DROSHAQ9NRR4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC21.57■■□□□ 1.049e-6■□□□□ 9.6
DROSHAQ9NRR4 VDAC2-213ENST00000498394 804 ntTSL 521.53■■□□□ 1.049e-6■□□□□ 9.6
DROSHAQ9NRR4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC21.46■■□□□ 1.039e-6■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.029e-6■□□□□ 9.6
DROSHAQ9NRR4 POLR2F-210ENST00000484894 551 ntTSL 421.29■■□□□ 19e-6■□□□□ 9.6
DROSHAQ9NRR4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC21.25■□□□□ 0.999e-6■□□□□ 9.6
DROSHAQ9NRR4 CACYBP-204ENST00000426793 499 ntTSL 321.08■□□□□ 0.969e-6■□□□□ 9.6
DROSHAQ9NRR4 VDAC2-209ENST00000470745 661 ntTSL 321.08■□□□□ 0.969e-6■□□□□ 9.6
DROSHAQ9NRR4 NUP188-211ENST00000550219 886 ntTSL 1 (best)20.91■□□□□ 0.949e-6■□□□□ 9.6
DROSHAQ9NRR4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.929e-6■□□□□ 9.6
DROSHAQ9NRR4 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC20.65■□□□□ 0.99e-6■□□□□ 9.6
DROSHAQ9NRR4 HGS-211ENST00000573949 461 ntTSL 520.64■□□□□ 0.899e-6■□□□□ 9.6
DROSHAQ9NRR4 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC20.57■□□□□ 0.889e-6■□□□□ 9.6
DROSHAQ9NRR4 KHSRP-210ENST00000599395 837 ntTSL 520.44■□□□□ 0.869e-6■□□□□ 9.6
DROSHAQ9NRR4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC20.4■□□□□ 0.869e-6■□□□□ 9.6
DROSHAQ9NRR4 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC20.29■□□□□ 0.849e-6■□□□□ 9.6
DROSHAQ9NRR4 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC20.29■□□□□ 0.849e-6■□□□□ 9.6
DROSHAQ9NRR4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC20.22■□□□□ 0.839e-6■□□□□ 9.6
DROSHAQ9NRR4 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC20.12■□□□□ 0.819e-6■□□□□ 9.6
DROSHAQ9NRR4 EIF3B-207ENST00000465670 2766 ntTSL 220.01■□□□□ 0.799e-6■□□□□ 9.6
DROSHAQ9NRR4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC19.84■□□□□ 0.779e-6■□□□□ 9.6
DROSHAQ9NRR4 MICA-210ENST00000616296 2260 ntTSL 5 BASIC19.6■□□□□ 0.739e-6■□□□□ 9.6
DROSHAQ9NRR4 CYP2F2P-201ENST00000437853 1056 ntBASIC19.57■□□□□ 0.729e-6■□□□□ 9.6
DROSHAQ9NRR4 HAX1-202ENST00000435087 822 ntTSL 319.5■□□□□ 0.719e-6■□□□□ 9.6
DROSHAQ9NRR4 RNF166-206ENST00000564894 574 ntTSL 419.49■□□□□ 0.719e-6■□□□□ 9.6
DROSHAQ9NRR4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.79e-6■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-209ENST00000525242 542 ntTSL 419.32■□□□□ 0.689e-6■□□□□ 9.6
DROSHAQ9NRR4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC19.14■□□□□ 0.659e-6■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC19.04■□□□□ 0.649e-6■□□□□ 9.6
DROSHAQ9NRR4 FCHO1-234ENST00000600676 3094 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.629e-6■□□□□ 9.6
DROSHAQ9NRR4 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.612e-11■□□□□ 9.6
DROSHAQ9NRR4 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC18.8■□□□□ 0.69e-6■□□□□ 9.6
DROSHAQ9NRR4 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC18.58■□□□□ 0.569e-6■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-219ENST00000531879 2922 ntTSL 218.53■□□□□ 0.569e-6■□□□□ 9.6
DROSHAQ9NRR4 TP73-AS1-206ENST00000608600 597 ntTSL 518.09■□□□□ 0.499e-6■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC17.83■□□□□ 0.459e-6■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-208ENST00000524984 3512 ntTSL 217.37■□□□□ 0.379e-6■□□□□ 9.6
DROSHAQ9NRR4 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC16.87■□□□□ 0.299e-6■□□□□ 9.6
DROSHAQ9NRR4 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.249e-6■□□□□ 9.6
DROSHAQ9NRR4 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.219e-6■□□□□ 9.6
DROSHAQ9NRR4 CYP2F2P-202ENST00000641827 1004 ntBASIC16.13■□□□□ 0.179e-6■□□□□ 9.6
DROSHAQ9NRR4 FCHO1-218ENST00000596951 2979 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.169e-6■□□□□ 9.6
DROSHAQ9NRR4 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC15.91■□□□□ 0.149e-6■□□□□ 9.6
DROSHAQ9NRR4 AC092123.2-201ENST00000611189 5421 ntBASIC15.51■□□□□ 0.071e-6■□□□□ 9.6
DROSHAQ9NRR4 HAX1-207ENST00000477780 1089 ntTSL 215.42■□□□□ 0.069e-6■□□□□ 9.6
DROSHAQ9NRR4 HAX1-203ENST00000447768 842 ntTSL 515.4■□□□□ 0.069e-6■□□□□ 9.6
DROSHAQ9NRR4 PRRC2B-208ENST00000465931 5366 ntTSL 215.1■□□□□ 0.018e-9■□□□□ 9.6
DROSHAQ9NRR4 FCHO1-216ENST00000596536 3204 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.029e-6■□□□□ 9.6
DROSHAQ9NRR4 PRRC2B-201ENST00000320547 4950 ntTSL 214.68□□□□□ -0.068e-9■□□□□ 9.6
DROSHAQ9NRR4 AL672142.1-201ENST00000482796 378 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.159e-6■□□□□ 9.6
DROSHAQ9NRR4 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.229e-6■□□□□ 9.6
DROSHAQ9NRR4 CACYBP-205ENST00000461977 574 ntTSL 213.54□□□□□ -0.249e-6■□□□□ 9.6
DROSHAQ9NRR4 CLTC-212ENST00000580081 575 ntTSL 413.35□□□□□ -0.279e-6■□□□□ 9.6
DROSHAQ9NRR4 NUP188-201ENST00000372577 5689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.289e-6■□□□□ 9.6
DROSHAQ9NRR4 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.338e-9■□□□□ 9.6
DROSHAQ9NRR4 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.449e-6■□□□□ 9.6
DROSHAQ9NRR4 DSTYK-201ENST00000367161 7739 ntTSL 1 (best) BASIC12.01□□□□□ -0.499e-6■□□□□ 9.6
DROSHAQ9NRR4 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC11.96□□□□□ -0.499e-6■□□□□ 9.6
DROSHAQ9NRR4 DSTYK-202ENST00000367162 7874 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.519e-6■□□□□ 9.6
DROSHAQ9NRR4 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC11.55□□□□□ -0.569e-6■□□□□ 9.6
DROSHAQ9NRR4 VDAC2-201ENST00000298468 931 ntTSL 510.89□□□□□ -0.679e-6■□□□□ 9.6
DROSHAQ9NRR4 NDUFAB1-204ENST00000567761 520 ntTSL 310.67□□□□□ -0.79e-6■□□□□ 9.6
DROSHAQ9NRR4 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.759e-6■□□□□ 9.6
DROSHAQ9NRR4 ROR2-203ENST00000476440 316 ntTSL 510.08□□□□□ -0.82e-7■□□□□ 9.6
DROSHAQ9NRR4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC9.8□□□□□ -0.849e-6■□□□□ 9.6
DROSHAQ9NRR4 NUP188-202ENST00000464729 408 ntTSL 29.29□□□□□ -0.929e-6■□□□□ 9.6
DROSHAQ9NRR4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.969e-6■□□□□ 9.6
DROSHAQ9NRR4 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.049e-6■□□□□ 9.6
DROSHAQ9NRR4 BACH1-210ENST00000547141 315 ntTSL 27.55□□□□□ -1.29e-6■□□□□ 9.6
DROSHAQ9NRR4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.449e-6■□□□□ 9.6
DROSHAQ9NRR4 DPY30-206ENST00000446765 1519 ntTSL 53.91□□□□□ -1.789e-6■□□□□ 9.6
DROSHAQ9NRR4 BACH1-209ENST00000546469 485 ntTSL 33.77□□□□□ -1.819e-6■□□□□ 9.6
DROSHAQ9NRR4 BACH1-211ENST00000548219 325 ntTSL 23□□□□□ -1.939e-6■□□□□ 9.6
DROSHAQ9NRR4 BACH1-213ENST00000550131 349 ntTSL 22.9□□□□□ -1.949e-6■□□□□ 9.6
DROSHAQ9NRR4 BACH1-212ENST00000548467 217 ntTSL 22.23□□□□□ -2.059e-6■□□□□ 9.6
DROSHAQ9NRR4 CD63-212ENST00000552067 621 ntTSL 5 BASIC18.49■□□□□ 0.552e-8■□□□□ 9.6
DROSHAQ9NRR4 CD63-205ENST00000548117 499 ntTSL 217.85■□□□□ 0.452e-8■□□□□ 9.6
DROSHAQ9NRR4 CD63-207ENST00000548898 727 ntTSL 2 BASIC17.85■□□□□ 0.452e-8■□□□□ 9.6
DROSHAQ9NRR4 CD63-216ENST00000555199 230 ntTSL 216.33■□□□□ 0.22e-8■□□□□ 9.6
DROSHAQ9NRR4 CD63-206ENST00000548160 648 ntTSL 2 BASIC15.15■□□□□ 0.022e-8■□□□□ 9.6
DROSHAQ9NRR4 MTCO1P2-201ENST00000554243 703 ntBASIC13.1□□□□□ -0.312e-8■□□□□ 9.6
DROSHAQ9NRR4 SNORD1B-201ENST00000363091 84 ntBASIC-2.53□□□□□ -2.812e-8■□□□□ 9.6
DROSHAQ9NRR4 MAPK8IP3-213ENST00000568271 752 ntTSL 522.5■■□□□ 1.191e-6■□□□□ 9.6
DROSHAQ9NRR4 PICALM-215ENST00000531558 565 ntTSL 539.59■■■■□ 3.932e-22■□□□□ 9.6
DROSHAQ9NRR4 PICALM-218ENST00000532041 699 ntTSL 336.2■■■■□ 3.392e-22■□□□□ 9.6
DROSHAQ9NRR4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC34.61■■■■□ 3.132e-22■□□□□ 9.6
DROSHAQ9NRR4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC34.07■■■■□ 3.052e-22■□□□□ 9.6
DROSHAQ9NRR4 SLC16A3-218ENST00000583444 2882 nt27.24■■□□□ 1.952e-9■□□□□ 9.6
DROSHAQ9NRR4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC49.9■■■■■ 5.582e-6■□□□□ 9.6
DROSHAQ9NRR4 HRAS-207ENST00000468682 749 ntTSL 330.23■■■□□ 2.432e-6■□□□□ 9.6
DROSHAQ9NRR4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.292e-6■□□□□ 9.6
DROSHAQ9NRR4 HRAS-211ENST00000493230 1114 ntTSL 1 (best)28.43■■■□□ 2.142e-6■□□□□ 9.6
DROSHAQ9NRR4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC25.44■■□□□ 1.662e-6■□□□□ 9.6
DROSHAQ9NRR4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.662e-6■□□□□ 9.6
Retrieved 100 of 16,331 protein–RNA pairs in 209.8 ms