Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 RASA4DP-201ENST00000460726 1199 ntBASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHB16Q9NRJ7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 AL391807.1-203ENST00000604392 2365 ntBASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 SLC25A3P1-201ENST00000443844 931 ntBASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 AL662844.4-201ENST00000606367 2838 ntBASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHB16Q9NRJ7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms