Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLK4Q9HAZ1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CLK4Q9HAZ1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLK4Q9HAZ1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 AC105020.1-201ENST00000435356 2205 ntBASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 AP000867.3-201ENST00000524675 377 ntBASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 DOC2GP-204ENST00000639052 2548 ntBASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.88■□□□□ 0.29
CLK4Q9HAZ1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLK4Q9HAZ1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 NSUN5P1-202ENST00000421140 1535 ntBASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 NSUN5P2-203ENST00000457352 1529 ntBASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK4Q9HAZ1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms