Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 WASH6P-202ENST00000359512 1437 ntBASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 COPE-202ENST00000349893 948 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 HCG4-201ENST00000418983 998 ntBASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 TREML5P-201ENST00000421694 576 ntBASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 TERF1P3-201ENST00000505638 1227 ntBASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 AC015922.1-201ENST00000421102 1152 ntBASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 UGT1A2P-201ENST00000454886 866 ntBASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 RN7SL204P-201ENST00000582831 262 ntBASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 AL158211.3-201ENST00000607385 239 ntBASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDH11XQ9BZA7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 AC104581.1-202ENST00000635932 2618 ntBASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 MTRF1LP2-201ENST00000506027 1122 ntBASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH11XQ9BZA7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 RNU1-129P-201ENST00000384064 167 ntBASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 AC244107.1-201ENST00000442033 332 ntBASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 TSPY16P-201ENST00000449843 468 ntBASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 MIR3909-201ENST00000579518 119 ntBASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 U1.21-201ENST00000580816 167 ntBASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 AL390754.1-201ENST00000619088 582 ntBASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH11XQ9BZA7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms